Gene Information

Name : Clos_2397 (Clos_2397)
Accession : YP_001513925.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Virulence
Product : glycyl-radical activating family protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1180
EC number : 1.97.1.4
Position : 2572090 - 2573040 bp
Length : 951 bp
Strand : -
Note : KEGG: cbo:CBO2117 pyruvate formate-lyase activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Radical SAM domain protein

DNA sequence : 
ATGAGTAATAAAAAGGCAGCTGTAATTGAGAGAAAAGCAGTGATATTCAATATACAAAAATACAATATGTACGATGGGCC
TGGCATAAGAACCATGGTGTTTTTTAAGGGGTGCCCCCTACGCTGTAAATGGTGCTCGAACCCTGAAGGACTAGAAAGAA
AATATCAAGTAATGTTTAAGCGAAATTCTTGTACGGATTGCGGTGCTTGTGTACCTGTTTGTCCCGTTGGAATTCATTCA
ATCAATCAAGAAGGAAAGCATGTAATCAATCGAGAGATTGATTGCATCGGCTGTAGAAAATGTGAAGAAATCTGTATTGA
ATCTGCTTTATCCATTGTAGGACAGGTAAAAACAGTCTCCGAGCTTTTAGAAATCATAGAAGAGGACACCGCTTTTTATG
AGATGTCCGGCGGTGGCGTTACACTAAGCGGTGGAGAAGTTACCATGCAGCCAGAATTTGCTACCAATCTATTAATGACA
TGTAAAAATGAAGGCATCAATACTGCAATTGAAACCTGCGGCTATACAAAGCTAGAGGATATACTTCAAATTGCACAGTT
TACAGATTTATTTTTATTCGATTTAAAACATATGGATTCAGAAAAACATTACCACTTTACTGGCGTGCGCAATGAAAGAA
TTCTAGACAATTTAAAAGAATTGTTAGAGCGTCGATATAATGTGCAGATTAGAATGCCACTTTTAAAAGGCGTAAATGAT
GGTCAGGAAGATATCGAAAAAATAGTGAAATTCTTAATGCCTTATAAGGATTACAAGAACTTCAAAGGAATTGATCTACT
GCCTTATCATAAATTAGGAGTCAATAAGTACAATCAACTGGACATGGAATATCCATTGAAAGGTGAAGTATCTTTAACCA
TAGAGGACTTAGAAAGAGTGGAAGGCTGGATTAAGCAGTACGACTTCCCAGTGAACATCGTAAGACATTAA

Protein sequence : 
MSNKKAAVIERKAVIFNIQKYNMYDGPGIRTMVFFKGCPLRCKWCSNPEGLERKYQVMFKRNSCTDCGACVPVCPVGIHS
INQEGKHVINREIDCIGCRKCEEICIESALSIVGQVKTVSELLEIIEEDTAFYEMSGGGVTLSGGEVTMQPEFATNLLMT
CKNEGINTAIETCGYTKLEDILQIAQFTDLFLFDLKHMDSEKHYHFTGVRNERILDNLKELLERRYNVQIRMPLLKGVND
GQEDIEKIVKFLMPYKDYKNFKGIDLLPYHKLGVNKYNQLDMEYPLKGEVSLTIEDLERVEGWIKQYDFPVNIVRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42072.1 hypothetical protein Not tested PAI II 536 Protein 3e-70 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_2397 YP_001513925.1 glycyl-radical activating family protein VFG1591 Protein 2e-70 51