Gene Information

Name : Clos_2400 (Clos_2400)
Accession : YP_001513928.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2577350 - 2577652 bp
Length : 303 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: dde:Dde_3284 carbon dioxide concentrating mechanism protein (PduA related)-like

DNA sequence : 
ATGAATACTTATAAAGCCTTAGGATTAATAGAGACATTTGGTATCGTTTATGTTTTAGAGGCAGCAGATGCAATGTGTAA
ATCTGCAGACGTAGAGTTAATCGGTTTTGAAAACGTAGCTTCAGGTTATATCTCTGTACTGGTTAGAGGAGATGTAGGTG
CATGTAAAGCAGCGGTAGAAAGTGGTGTACAGGCTGTTAAGAACATGGGATCTGAAGTTTATAGCTCCGTAGTTATTGCA
AGCCCGCACCATGATATAGAGAAAATTATCGGAAGATATTCTTTAGAAAACCTAAATCTTTAA

Protein sequence : 
MNTYKALGLIETFGIVYVLEAADAMCKSADVELIGFENVASGYISVLVRGDVGACKAAVESGVQAVKNMGSEVYSSVVIA
SPHHDIEKIIGRYSLENLNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-19 62
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-20 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 5e-19 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_2400 YP_001513928.1 microcompartments protein VFG1596 Protein 1e-19 62
Clos_2400 YP_001513928.1 microcompartments protein VFG1597 Protein 8e-21 60
Clos_2400 YP_001513928.1 microcompartments protein VFG1598 Protein 2e-19 59