Gene Information

Name : Clos_0368 (Clos_0368)
Accession : YP_001511926.1
Strain : Alkaliphilus oremlandii OhILAs
Genome accession: NC_009922
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 421122 - 421499 bp
Length : 378 bp
Strand : +
Note : PFAM: microcompartments protein; KEGG: chy:CHY_0684 bacterial microcompartments family protein

DNA sequence : 
GTGAAGGCAGCCTTAGGATTAATCGAAGCAATTGGATTGACTACTGCCATTACGGCCCTAGATGCGGCTAGTAAGGCGGC
AGATATAAAGCTGGTGGGCTATGAAAAGGTGATTGGCGCTGGTAAAGCAGTCAGTGTCACCATACAGATCGCTGGAGATG
TAGCCGCGGTAAAAGCCAGTGTGGATGCAGGGGTGGCGGCGGCGAATAAAATTGGTCAAGTTCTATCCTACCATGTGATT
CCCCGACCTCACGAAGAGGTGGATTTACTGATTAAAGCCTTTGAAAAAAATTTAAAATCCAAGGATCAAAAATCTTTAGA
AGGTATGGAAGAAAATAAGAAAAACAAGGATAAAAAAACGAAGAAAGAGGAGGAATAA

Protein sequence : 
MKAALGLIEAIGLTTAITALDAASKAADIKLVGYEKVIGAGKAVSVTIQIAGDVAAVKASVDAGVAAANKIGQVLSYHVI
PRPHEEVDLLIKAFEKNLKSKDQKSLEGMEENKKNKDKKTKKEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 8e-16 52
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 50
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-15 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clos_0368 YP_001511926.1 microcompartments protein VFG1596 Protein 3e-16 52
Clos_0368 YP_001511926.1 microcompartments protein VFG1598 Protein 5e-15 50
Clos_0368 YP_001511926.1 microcompartments protein VFG1597 Protein 2e-15 48