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Name : glcD (AZC_0083) Accession : YP_001522999.1 Strain : Azorhizobium caulinodans ORS 571 Genome accession: NC_009937 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 101086 - 102645 bp Length : 1560 bp Strand : - Note : - DNA sequence : ATGCCGGATTTTCGCATCGAAACGATTATAGTCGCGGCAACGAGAACCATTCTAGGGACGACCGCCATGACGGGCCTCAG GCTTCCGGAAGCGGACGCGAGCGTGCTGGCACGCCGGGACGAGATCATCACCGCGCTGCGCGCCATCGTGCCGGGAGAAG GCGTCATCGATCGCGAGCGGGAGATGCGTCCTTATGAATCGGACGCGCTGACCGCCTATCGCCAGCTTCCCCTCGTGGTG GTGCTGCCCTCCAATACGCAGCAGGTCTCACAGGTGCTGCGCTATTGCCACGAGAACAACATCCGCGTGGTGCCGCGCGG GGCTGGCACCTCCCTCTCCGGCGGCGCGCTGCCGCTTCAGGATGCGGTGCTGCTCGGCATGGGCAAGTTCAACCGCGTGC TGGACATCGACTTTCCCAACCGCTGCGCGGTGGTGCAGCCGGGCGTCACCAACCTCGGCATCACGAAAGCCGTAGAGCAT GAGGGCTTCTATTACGCCCCCGACCCCTCCTCGCAGATCGCCTGCACCATCGGCGGCAATGTGGGCGAGAATTCCGGCGG CGTGCACTGCCTGAAATACGGCCTCACCACCAACAATGTGCTGGGCGTCGAGCTGGCGCTCATCACCGGCGAGATCGTGC GTCTCGGCGGCAAGCATCTGGACGCGGGTGGCCTCGACCTGCTCAGCGTCGTCATCGGCTCGGAAGGGCTGCTGGGCGTC GTCACCGAAGTCACCGTCCGCCTGCTCAAGAAGCCGGACACGGCGCGCGCCGTGCTGGTGGGCTTTCCCACCTCCGAGGA TGCGGGCGAATGCGTGGCCCGCACCATCGCCGCCGGCATCATCCCCGCCGGCATCGAGATGATGGACAAGGACGCTATCG CCGCCGCCGAAGCCTTCGTGAAGGTGGGCTATCCGCTCGATGTGGAAGCCCTGCTCATCATCGAGCTGGACGGACCGGAA GCGGAATGCGCGCACCTGCTGGAAGAGGTCGCCGCCATCGCGCGCGGCTGCAACGCCTCCACCTTGCGCGTGTCGCAGAC GGAAGAGGAGCGCATGGGCTTCTGGGCCGGGCGCAAGGCCGCCTTCCCGGCGGTGGGGCGCATCTCGCCGGACTATCTCT GCATGGACGGCACCATCCCGCGCAAGGCACTGCCGCTGGTGCTCTCGCGGATGCGCGAACTCTCCGAAAAACACGGCCTC AAGTGCGCCAACGTCTTCCACGCGGGCGACGGCAATCTGCACCCGCTCATCCTCTATGACGCGAACAAGGGCGAGATGGA CGCGGCCGAGGCCTTCGGCGCCGATATCCTGCGCCTGTGCGTGGAGGTGGGCGGCGTGCTCACCGGCGAGCATGGCGTGG GCATCGAGAAGCGCGACCTGATGCCGGAGATGTTCGACGAGGTGGACCTGGCCCACCAGCAGCGTCTGAAATGCGCCTTC GACCCGGAAAGCCTGCTCAATCCGGGCAAGGTGTTCCCCACGCTGCACCGCTGCGCCGAGCTGGGCCGGATGCATGTGGC GGGCGGCGCGCTGCCCTTCCCCGACCTTCCCCGTTTCTGA Protein sequence : MPDFRIETIIVAATRTILGTTAMTGLRLPEADASVLARRDEIITALRAIVPGEGVIDREREMRPYESDALTAYRQLPLVV VLPSNTQQVSQVLRYCHENNIRVVPRGAGTSLSGGALPLQDAVLLGMGKFNRVLDIDFPNRCAVVQPGVTNLGITKAVEH EGFYYAPDPSSQIACTIGGNVGENSGGVHCLKYGLTTNNVLGVELALITGEIVRLGGKHLDAGGLDLLSVVIGSEGLLGV VTEVTVRLLKKPDTARAVLVGFPTSEDAGECVARTIAAGIIPAGIEMMDKDAIAAAEAFVKVGYPLDVEALLIIELDGPE AECAHLLEEVAAIARGCNASTLRVSQTEEERMGFWAGRKAAFPAVGRISPDYLCMDGTIPRKALPLVLSRMRELSEKHGL KCANVFHAGDGNLHPLILYDANKGEMDAAEAFGADILRLCVEVGGVLTGEHGVGIEKRDLMPEMFDEVDLAHQQRLKCAF DPESLLNPGKVFPTLHRCAELGRMHVAGGALPFPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-128 | 57 |
