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Name : rnhA (Dshi_0182) Accession : YP_001531532.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 185190 - 185663 bp Length : 474 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCCTGAGCTTTTCGCCTACACGGACGGGGCCTGTTCGGGCAACCCGGGGCCCGGCGGCTGGGGGGCGCTGCTCATCGC CCGCGACGGCGATACGGTCGTCAAGGAGCGCGCGCTCAAGGGCGGCGAGGCCGAGACCACCAACAACCGGATGGAGCTTC TGGCCGCGATCCACGCGCTGGAAGCGCTGGAACGGCCCGCCAGGCTGACCGTCGTGACCGACAGCGCCTATGTGAAAGGC GGGGTCACGGGCTGGATCCACGGCTGGAAGCGCAATGGCTGGAAAACCTCGACCAAGAAGCCGGTGAAGAACGAGGACCT CTGGCGCAGGCTCGATGCCGCCCAGGCCCGGCACGAGGTGCAGTGGGAATGGGTCAAGGGCCATGCAGGCCACCCGGAAA ACGAACGCGCGGACGCGCTGGCCCGGGAAGGCATGGCGCCCTTCAAGCCCGGCAAATCCAAAGCGGGCCGCTGA Protein sequence : MPELFAYTDGACSGNPGPGGWGALLIARDGDTVVKERALKGGEAETTNNRMELLAAIHALEALERPARLTVVTDSAYVKG GVTGWIHGWKRNGWKTSTKKPVKNEDLWRRLDAAQARHEVQWEWVKGHAGHPENERADALAREGMAPFKPGKSKAGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 3e-29 | 54 |
