|
Name : Dshi_2894 (Dshi_2894) Accession : YP_001534228.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 3049140 - 3050444 bp Length : 1305 bp Strand : - Note : COG: COG0247 - Fe-S oxidoreductase; PFAM: PF00037, PF02754; PROSITE: PS00198; SWISSPROT P52074: Glycolate oxidase iron-sulfur subunit; similar to glycolate oxidase iron-sulfur subunit DNA sequence : ATGCAAACCCATTTCACCCCCGAGCAGCTCAAGGATCCGGCCACGGCCCGGTCCAACGAGATCCTGCGCAGCTGCGTCCA TTGCGGGTTCTGCACCGCGACCTGCCCGACCTACCAGGTACTGGGCGACGAGCTCGACAGCCCGCGGGGCCGGATCTATC TGATCAAGGACATGATCGAGAACGACCGGCCCGCGGACCCGCAGACCGTCAAGCATATCGACCGCTGCCTGAGCTGCCTT GCCTGCATGACCACCTGCCCCTCGGGGGTGCATTACATGCACCTGGTCGATCACGCGCGGGAGTATATCGAGAACACCTA CAAGCGGCCCCTGTACGAACGCATGCTGCGCTGGACGCTGGCGCGGATCCTGCCCTATCCGATGCGGTTCCGAGTGGCGA TGCTGGGCGCGAAGATCGCGCGCCCCTTCGCGGGCCTGATCCCCGAAAAGCGCCTGCGCGCCATGGTGGAGATGGCGCCC AAAACCATCCCGCCGGTCAGCCGCAATGACGACCCGCAGGTCTTCCCGGCCATTGGCCCGCGCCGTAAGCGCGTGGCGCT GATGACCGGCTGCGCCCAGCGGGCGCTGAACACCGATATCAACGATGCCACGATCCGGGTGCTGCGGCGGCTCGGCTGCG AGGTGGTGATCGCGGAAGGGCAGGGCTGCTGCGGGGCGCTGACCCATCACATGGGCAAAACCGCCGAGAGCCATGGGACC GCGGCCCACAACATTCGTGCCTGGCACCGCGAGATGGCGGGCGAAGGCCTCGACGCCATCGTCATCAACACCTCGGGCTG CGGCACGACGGTGAAGGATTACGGCCACATGTTCCGCAACGAGGCGCTGGCCCAAGAGGCCGCCGCGGTGGCCGCCATCG CCAGGGACATCTCCGAGGTGCTGATCGACCTGGAGGTGCCCGAACAGGATCGCTTCAGCCAGGGCCTGACCGTGGCTTAT CATGCCGCGTGCTCGCTGCAACATGGCCAGCAGATCAAGACCTATCCCAAGGACCTGCTGCGCCGGGTCGGGTTCAAGGT GGTGGAGCCGGAGGACGCGCATCTGTGCTGCGGTTCGGCCGGGACCTACAACCTGATGCAACCGGACATCTCCAAGGAAC TGAAGGCGCGGAAAGTCGCCACTCTGGAGGCCAAGGCGCCGGATCTGATTGCCGCGGGCAATATCGGCTGCATGATGCAG ATCGGCTCTGGCACCGGCATCCCGATCGTGCATACGGTCGAGCTTATCGACTGGGCGACGGGCGGACCGAAACCTGCTGG GCTGGGTACGGTGGAGGCTGCCTGA Protein sequence : MQTHFTPEQLKDPATARSNEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMIENDRPADPQTVKHIDRCLSCL ACMTTCPSGVHYMHLVDHAREYIENTYKRPLYERMLRWTLARILPYPMRFRVAMLGAKIARPFAGLIPEKRLRAMVEMAP KTIPPVSRNDDPQVFPAIGPRRKRVALMTGCAQRALNTDINDATIRVLRRLGCEVVIAEGQGCCGALTHHMGKTAESHGT AAHNIRAWHREMAGEGLDAIVINTSGCGTTVKDYGHMFRNEALAQEAAAVAAIARDISEVLIDLEVPEQDRFSQGLTVAY HAACSLQHGQQIKTYPKDLLRRVGFKVVEPEDAHLCCGSAGTYNLMQPDISKELKARKVATLEAKAPDLIAAGNIGCMMQ IGSGTGIPIVHTVELIDWATGGPKPAGLGTVEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 4e-76 | 41 |
