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Name : Dshi_4051 (Dshi_4051) Accession : YP_001542259.1 Strain : Genome accession: NC_009957 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 110303 - 112303 bp Length : 2001 bp Strand : + Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: mag:amb4200 cytochrome c biogenesis factor DNA sequence : ATGGTCCCGGAAATTGGTCACTTCGCACTGGCCCTCGCACTGGCGCTTGCGCTTGTTCAGAGTGTTCTACCGATTGCAGG TGCGTCGCGTAGAAATGCCGTCTGGATGAAATCCGCCCAGGCGACGGCAATAGGACAAGTGCTGTTTGTGGCCATCGCCT TCGCAGCGCTGATGCAGGCTTTCATCGTCAGCGATTTTACCGTCAGGAACGTCGTCGAGAACTCCCATTCGCTCAAGCCA ATGCTCTACAAGGTGGCCGGGACCTGGGGCAGCCATGAGGGTTCGCTGCTGCTCTGGATCCTGATACTCGCGGTGTTCGG CGCGGGCGTCGCCTGGTTCGGATCGAACATCCCCGCCGAGACCAAGGCGCGCACCTTGTCGGTGCAGGCGTGGATCAGCG TCGGCTTCCTGTCCTTCCTGCTGCTGACGTCGAACCCCTTCGAGCGGGTGTTTCCGCCGCCGCTCGACGGCAATGACCTC AACCCGTTGCTTCAGGACATGGGTCTCGCCATGCACCCGCCGCTCTTGTATTTCGGGTATGTCGGCTTCTCCATCGTGTT TTCCTTTGCCGTTGCGGCTCTTCTGGAAGGGCGCGTCGATCCGGCCTGGGCCAGATGGGTCCGCCCGTGGACATTGGCCG CGTGGGTCAGCCTTACGGCAGGTATCGCTCTTGGATCGTGGTGGGCCTATTATGAACTGGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTCGAGAACGTGAGCTTCATGCCCTGGCTTCTGGGCACGGCGCTGCTGCATTCCGCCATCGTCACCGAAAA GCGCGACGCGTTCAAAAGCTGGACCATCCTACTTGCCATCCTGACTTTCTCGCTTTCGCTGCTCGGGACGTTCATCGTCC GGTCAGGCCTGCTTACATCCGTGCATGCCTTCGCCGTCGATCCAGAGCGCGGGCTTTACATTCTGGGTCTGCTGGCCGTG TCCATCGGTGGGTCGCTGGCGCTCTACGCCTGGCGGGCGCCCGAAATGGAGCCGGGTGGTCTGTTTCGCCCGATCAGCCG CGAGGCCGGGCTGCTCGTGAACAACCTCATTCTGGCCGCCGCTACGGGAACGGTCCTGTTCGGGACGCTTTATCCACTGA TCCTGGAGGCTGTCACCGGGGACAAGATCTCGGTCGGTCCACCTTTCTTCAACGCGGCCTTCATTCCGATGATGCTGGCA CTGGTCGTGTTCATGGGTCTTGGTCCATTCCTGTCGTGGAAGCGGGCTGATATCGCCGGTTTGCTCGATCGCATCCAATT CGTGGCCGTGCTGGCGGTCATTGCAGCCTTGGCCGCATGGTATCTTCTGAACGGTGGGCCGATCATGGCCTATCTTGCCA TCCTCGGCGCAGCGTGGCTGCTTTTTGCGACCCTGCGGGAATGGGCGCTACGCATCCGTCTGTTCGAGGTTTCCCTTGCA GAGAGCGCGAGACGCGTGCGCAACCTGCCACGCGCCTCTCACGGTATGACGCTTGCCCATGCCGGCGTCGCTGTGTTGAT GATGGGGATGATCGGCTCGACCGGATGGAAGAGTGAGGAGATCGTCTTTGCCGCCCCCGGGACCGAAGTCACGATCGCCG GGTTCGACATCACCTTCGAAGGGGCCGCAAAGGTTCAAGGGCCGAACTACATCGCGGATCGCGGCACCCTTGTGGTGCGT CGGGATGGCGAATTGGTCACGACACTTTTCCCGGAACGGCGGTATTACCCGGTCGCGGAAAGCCAGACGACGGAGTCGGC CATCCGCTCCACATTGGCGGGTGATCTCTATACGTCGATTGCAACGCCAGCCTCCGATCAAGTGAACAACGCCGGAGCAT GGACCCTTCGGATCCTTTATGAACCGCTCGTCAACCTGATCTGGATCGGCTCGATCCTGCTGGTGATCGGTGGCTGTTTG TCCTTGTCGGATCGCCGTTTGAGGGTCGGGGCGCCGCGCCGTGCCAAACAGCCAGCCACCGATGCCGTTCCTGCCGAGTA G Protein sequence : MVPEIGHFALALALALALVQSVLPIAGASRRNAVWMKSAQATAIGQVLFVAIAFAALMQAFIVSDFTVRNVVENSHSLKP MLYKVAGTWGSHEGSLLLWILILAVFGAGVAWFGSNIPAETKARTLSVQAWISVGFLSFLLLTSNPFERVFPPPLDGNDL NPLLQDMGLAMHPPLLYFGYVGFSIVFSFAVAALLEGRVDPAWARWVRPWTLAAWVSLTAGIALGSWWAYYELGWGGWWF WDPVENVSFMPWLLGTALLHSAIVTEKRDAFKSWTILLAILTFSLSLLGTFIVRSGLLTSVHAFAVDPERGLYILGLLAV SIGGSLALYAWRAPEMEPGGLFRPISREAGLLVNNLILAAATGTVLFGTLYPLILEAVTGDKISVGPPFFNAAFIPMMLA LVVFMGLGPFLSWKRADIAGLLDRIQFVAVLAVIAALAAWYLLNGGPIMAYLAILGAAWLLFATLREWALRIRLFEVSLA ESARRVRNLPRASHGMTLAHAGVAVLMMGMIGSTGWKSEEIVFAAPGTEVTIAGFDITFEGAAKVQGPNYIADRGTLVVR RDGELVTTLFPERRYYPVAESQTTESAIRSTLAGDLYTSIATPASDQVNNAGAWTLRILYEPLVNLIWIGSILLVIGGCL SLSDRRLRVGAPRRAKQPATDAVPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 6e-122 | 49 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-87 | 46 |
