Gene Information

Name : Cphy_1181 (Cphy_1181)
Accession : YP_001558298.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1497514 - 1497816 bp
Length : 303 bp
Strand : +
Note : PFAM: microcompartments protein; KEGG: aha:AHA_1336 bacterial microcompartments family protein

DNA sequence : 
ATGGGAAAATCGTTAGGCTTTATTGAAATCAGTGGTGTAACCGCAGCGATTGATGCCCTCGATATTATGTGTAAAACAGC
AGGTGTCGAGTTAGTTACATGGGAGAGAAAGATGGGTGGAAGGTTGGTTACAATCATCGTATCAGGATCTGTTTCCGAAG
TAACACAGGCAGTAGAATCAGCGGTAAATCAGGCAATTAAAAAACCAGTGGCCCATGCAGTCATTGCAAATCCTCATGAA
GAGGTTCTTCGCTTGGTAGATATCAGTGCAAGTAGAATGAAGCCACAAAACGAAGAAATGTAG

Protein sequence : 
MGKSLGFIEISGVTAAIDALDIMCKTAGVELVTWERKMGGRLVTIIVSGSVSEVTQAVESAVNQAIKKPVAHAVIANPHE
EVLRLVDISASRMKPQNEEM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 46
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 44
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_1181 YP_001558298.1 microcompartments protein VFG1597 Protein 4e-12 46
Cphy_1181 YP_001558298.1 microcompartments protein VFG1598 Protein 7e-12 44
Cphy_1181 YP_001558298.1 microcompartments protein VFG1596 Protein 1e-10 44