Gene Information

Name : Cphy_1183 (Cphy_1183)
Accession : YP_001558300.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 1498518 - 1499159 bp
Length : 642 bp
Strand : +
Note : PFAM: Propanediol utilization protein; KEGG: tma:TM0375 hypothetical protein

DNA sequence :
TTGGAAGATAATCAAATTGAACTCATAACCCGGATGGTATTAAATGTACTACAAGAAAAACAAAGCGGAAAAACAGGCTT
CGCGGTTCCAGTCGGTGTGTCTGCAAGACATCTTCATCTAACACAGGATCACGTAGAGCAATTGTTTGGAAAGGGTTATG
AATTAACTAAGAAAAAAGACCTCATGGGTGGCCAGTTTGCGGCAAACGAGACGGTTACCATTGTAGGATTAAAGCTTCGA
GCTATAGAGAATGTTAGAATATTAGGACCAGTGAGAAAGGCATCTCAGGTTGAAGTTTCTGCAACTGATGCAATCAAACT
GGGAGTTAAGATACCAATAAGAGAATCCGGTAACATAAAAGGATCTGCTCCGATTGCAGTGGTTGGACCAAAAGGTGCGA
TTTACTTGGATGAGGGATGTATAATTGCAAAACGTCATATCCATATGTCACCAACCGACGCTTCGACAGCTGGAGTTAAG
GATGGAGATATTGTTTCTGTCAAAGTAGACGATGAAAGAGAGACGGTATTTCATCAAGTACAAATCAGAGTAGATAGTAG
CTTTACCCTTGAGATGCATATCGATACGGATGAAGCGAATGCTGCAAAAATTACATGCGGACAGATAGTAACGATTTTAT
AA

Protein sequence :
MEDNQIELITRMVLNVLQEKQSGKTGFAVPVGVSARHLHLTQDHVEQLFGKGYELTKKKDLMGGQFAANETVTIVGLKLR
AIENVRILGPVRKASQVEVSATDAIKLGVKIPIRESGNIKGSAPIAVVGPKGAIYLDEGCIIAKRHIHMSPTDASTAGVK
DGDIVSVKVDDERETVFHQVQIRVDSSFTLEMHIDTDEANAAKITCGQIVTIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42070.1 hypothetical protein Not tested PAI II 536 Protein 5e-40 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_1183 YP_001558300.1 propanediol utilization protein VFG1589 Protein 3e-40 50