Gene Information

Name : Cphy_1363 (Cphy_1363)
Accession : YP_001558477.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1702350 - 1703054 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC0822 ABC transporter, ATP-binding protein

DNA sequence : 
ATGAATTCTTTTGTACGATTTGAAAATGTCGGAAAAACGTATCACTCAGGGGATGTTAAGGTTAACGCTCTGCATGATAC
TAGCTTTGAAGTAGATAAAGGAGAAATATGTATTATTGTAGGCCAGTCAGGTGCAGGTAAGACTACTCTACTGAACATTC
TGGGTGGGATGGATACCCTTACCACCGGTAAAGTGTTTCTTGGTGAAACAGAGATTTCATCCCTGAGCAAACGAGGTCTT
ATAAGTTACCGAAGAGAAGATATTGGTTTCGTATTCCAGTTCTATAATCTGATACCAAATCTGACCGCTCTTGAAAACGT
TGAGATAGCTTCCCAGATGATTAAGAATCCAATTCCTGCTGCAGAGATTCTTACTAGTGTAGGTCTTTCAGAGCGTCTCA
ATAACTTTCCTTCCCAGTTATCGGGTGGAGAACAGCAGCGTGTTTCCATTGCCCGCGCCCTAGCAAAGAACCCAAAACTT
TTATTATGTGATGAGCCTACTGGTGCACTGGATTATAATACGGGTAAACAAATTTTGCAATTATTACAGGATCAGAGTCG
CAAAAACGGAATGACCGTTATTATAATTACTCATAACTCCGCATTAACAGCTATGGCTGACCGGGTAATTCATATTAAGA
ATGGTACGGTCTCATCAGTCCGTAAAAATGAAAATGTAATACCTGTAGGGGAGATTGAATGGTAA

Protein sequence : 
MNSFVRFENVGKTYHSGDVKVNALHDTSFEVDKGEICIIVGQSGAGKTTLLNILGGMDTLTTGKVFLGETEISSLSKRGL
ISYRREDIGFVFQFYNLIPNLTALENVEIASQMIKNPIPAAEILTSVGLSERLNNFPSQLSGGEQQRVSIARALAKNPKL
LLCDEPTGALDYNTGKQILQLLQDQSRKNGMTVIIITHNSALTAMADRVIHIKNGTVSSVRKNENVIPVGEIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_1363 YP_001558477.1 ABC transporter NC_012469.1.7685735. Protein 6e-62 55
Cphy_1363 YP_001558477.1 ABC transporter NC_012469.1.7686878. Protein 2e-40 44
Cphy_1363 YP_001558477.1 ABC transporter CP001581.1.gene798.p Protein 2e-43 44
Cphy_1363 YP_001558477.1 ABC transporter CP001581.1.gene598.p Protein 2e-39 41