Gene Information

Name : Cphy_1411 (Cphy_1411)
Accession : YP_001558525.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1751684 - 1751974 bp
Length : 291 bp
Strand : +
Note : PFAM: microcompartments protein; KEGG: cbf:CLI_2149 bacterial microcompartments family protein

DNA sequence : 
ATGAAGTTTGATGCATTAGGAATGATTGAGACAAAAGGATTGGTTGGATCTATCGAAGCTGCGGATGCAATGGTGAAGGC
AGCGAATGTAACTCTTATTGGAAAAGAATTTGTAGGCGGTGGACTTGTAACCGTAATGGTTAGAGGAGATGTTGGTGCAG
TAAAAGCTGCAACTGATGCGGGAGCAGCAGCAGCGCAGCGAGTTGGAGAATTGGTTTCAGTTCATGTTATTCCACGCCCT
CACGGAGATGTAGCAATGATTCTTCCGCAAGAGAAAAAGGAGACTAGATAA

Protein sequence : 
MKFDALGMIETKGLVGSIEAADAMVKAANVTLIGKEFVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELVSVHVIPRP
HGDVAMILPQEKKETR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 68
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_1411 YP_001558525.1 microcompartments protein VFG1597 Protein 7e-16 68
Cphy_1411 YP_001558525.1 microcompartments protein VFG1596 Protein 2e-16 67
Cphy_1411 YP_001558525.1 microcompartments protein VFG1598 Protein 1e-14 63