Gene Information

Name : Cphy_1418 (Cphy_1418)
Accession : YP_001558532.1
Strain : Clostridium phytofermentans ISDg
Genome accession: NC_010001
Putative virulence/resistance : Virulence
Product : glycyl-radical activating family protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1180
EC number : 1.97.1.4
Position : 1758088 - 1759035 bp
Length : 948 bp
Strand : +
Note : KEGG: cbh:CLC_2059 glycyl-radical enzyme activating family protein; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Radical SAM domain protein

DNA sequence : 
ATGGACCATGGAAAATCAGGAGAGATTGAACGTAAGGCGTTTATATTTAACGTGCAGAAGTACAACATGTATGACGGGCC
GGGAATCAGAACCTTGGTATTCTTTAAAGGCTGTCCTCTTCGGTGTAAATGGTGCTCCAATCCGGAAGGTCTGGAACGAA
AATTTCAGGTAATGTATAAGCAAAGTTTTTGTACAAACTGCGGGGCGTGCGCTGATGTGTGCCCCGTAGGAATCCACGTG
ATGTCGAACGGAACACATGAAATTGTTCGGGAAAAGGAATGCATCGGCTGCATGAAGTGTAAAAACATCTGCCCAAAGTC
GGCGCTTACCATTGCAGGAGAGGTAAAGACCATTTCAGAACTGCTTAAGATTGTGGAAGAGGACGCTGCTTTTTATGATA
TGTCCGGAGGTGGCGTGACCCTTGGGGGTGGTGAAGTAACCGCACAACCAGAAGCGGCCTTAAATCTTTTGATGGCTTGT
AAACAGGAGGGAATCAACACAGCAATTGAAACTTGCGGTTATTCGAATACAGAGAACATTTTAAAAATTGCGGAATATGT
GGATCTTTTCCTGTTTGATATCAAACATATGGATCCAGTACGTCACAACGAGTTAACAGGTGTGAACAATGAACAGATTC
TTACTAACCTTGAGGAACTGCTTCACCGCCGCTATAACGTAAAAGTCCGTATGCCAATGTTAAAAGGAATTAATGACAGC
AGGGAAGAAATTGATGCGGTTATCAAGTTTTTAATGCCATACCGTACTGATAAGAACTTTAAGGGAATTGACTTACTTCC
ATACCATAAGCTCGGAGTTAATAAATACAATCAGCTTGATAAGGTATATCCGATTGACGGCGATCCTAGCTTAAGTGCTG
AGGATTTAGACCGAATTGAAGGTTGGATGAAAGAATACGATTTTCCGGTTAACGTGGTAAAACACTAA

Protein sequence : 
MDHGKSGEIERKAFIFNVQKYNMYDGPGIRTLVFFKGCPLRCKWCSNPEGLERKFQVMYKQSFCTNCGACADVCPVGIHV
MSNGTHEIVREKECIGCMKCKNICPKSALTIAGEVKTISELLKIVEEDAAFYDMSGGGVTLGGGEVTAQPEAALNLLMAC
KQEGINTAIETCGYSNTENILKIAEYVDLFLFDIKHMDPVRHNELTGVNNEQILTNLEELLHRRYNVKVRMPMLKGINDS
REEIDAVIKFLMPYRTDKNFKGIDLLPYHKLGVNKYNQLDKVYPIDGDPSLSAEDLDRIEGWMKEYDFPVNVVKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42072.1 hypothetical protein Not tested PAI II 536 Protein 7e-66 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cphy_1418 YP_001558532.1 glycyl-radical activating family protein VFG1591 Protein 4e-66 50