Gene Information

Name : Daci_2453 (Daci_2453)
Accession : YP_001563476.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 2711761 - 2713923 bp
Length : 2163 bp
Strand : -
Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: reh:H16_B2570 outer membrane receptor for Fe(III)-dicitrate

DNA sequence :
ATGGTTTCCAGCAATCACTGCGCCACGCTCACACGCTGCGCGGCCGCTGTCGCCGCCGCCCTGCTGTCGCTGCAGGCGTC
GGCACAGGCGCCATCCCCCACCACCACCGCACCCGAGGCCGGCCTGTCCGCCATCACCGTCACGGGCAACTGGCTGGACA
ACCCCACCGAGGAAAAGGTGCTGGACCATGCCGGCGCGCGCACCATCGTCGAACGGGCGCGCATCGAGGAAACCGGATCC
TCCAGCCTGCGCGACGTGCTGCGCCTGGTGCCCGGCGTGCAGGTGCAGGACAGCAACGGCACGGGCGGCAGCGACGTGTC
GCTGAACATCGGCGTGCGCGGCCTGACGGCGCGCCTGTCGCCGCGCTCGTATGTGCTGATGGACGGCGTGCCCGTCTCCT
ACGCGCCCTACGGCCAGCCCCAGCTGTCGCTGGCGCCCGTGTCGCTGGGCAACCTGGAGTCGGTGGACGTGATCCGCGGC
GCGGGCTCGGTGCGCTACGGCCCCCAGAACGTGGGAGGCATCATCAACTTCGTCACGCGCGCCATTCCCAAGACCTTCGC
GGCCGAGGCCTCGGTGGGCACCGAGATCTACAGCCACGGCGGCAATGCCAAGACCACGCCCAGCCTGTTCGTGGGCGGCA
CCAACGAATCCGGCCTGGGCCTGGCCCTGCTGTACTCGGGCACGCATGGCGACGGCTGGCGCGCAGGCAATGACAAGACC
GATATCGACGACATCCTGCTCAAGGGCGCCTACCGCATCTCGGCCCAGGACGACATCGCCGTCTCGCTGCACCACTTCGA
GGGCTCGGGCCGCATGCCCGGCGGCCTGACCACGGCGCAGTACGCGGCCGACCCGTTCCAGTCCACGCGCTCCTACGACA
GCTTCGACGGCCGCCGCACCGATGCCTCGTTCAAGTACAACCACAAGGACGGGCGCAACAACTTCGAGGTGCTTGGCTAC
TACGTGGACTCGTTCCGCGGCAGCTACATCGAGCAGGACAACGCCAACCAGCGCCGCCTGACGGCCGCGCCGCGCAGCTA
CCACTACTTCGGCATCGAGCCGCGCTACTCGCGCCTGTTCGAGACCGGCTCCGTGGTGCAGGAAGTCAGCGTGGGCTACC
GCTACCTCAAGGAAAGCAGTTCCGAGGTCGCGCTGCGCACGGCCTACTACAACCCCGCCACCATGGCCAACGCGATGGCC
CTGCCGATCACGCCCTACCAGACCAGCCAGGGCGGCACCACGGCCCATGCCTTCTACATCGATGACCGCATCGACATCGG
CAACTGGACCATCACCCCTGGCGTGCGCTACGAACGCATCAACTCCTTCAACAACGTCAGCAACCTGGGCGCCGATGGCA
GCACCGTCACCAGCCAGCTGTTCCCCAAGGCCGATGCAAGCGAGTTCCTGCCCACACTGTCCGTGCTCTACCGCATGAAT
GCGCAGTGGTCGCTGTTCGCCAACGCGGGCAAGTCCTTCGGCCCGCAGCAGTACGCACAGCTGGCCCAGACCGAGCGCGG
CCTGCATCCCGAATCGGCCAAGACCTATGAGGTGGGCACGCACTACAACAGCCCGGCGCTGAACGCCGAGCTGACGCTGT
TCAACATCGACTTCGACAAGGAACTGCTGCTGACCCGCGTGGGCGTGGACGGCATCTGGACCGACCTGGGCGCCACGCGC
CACCGAGGCATCGAGTCCTCGCTGCGCTACGACCTGGGCCAGTGGAATGCCGCGCTCAAGGGGCTGACGGCGGGTGTGTC
CTATACCTACACCGAGGCCGTCTCGCGCGCTGGCGATTTCGCGGGGCGCGACCTGCCGCTGTACTCGCGCCACACGGGCC
AGCTGTGGGCGCGCTATGCGCTGGGGCAGTGGACGCTGAATGCCGACCTGGCCGCGCAATCGAAGCAGCGCTCTCCGGGG
TCGGGCACGCAGTATGTGACGCAGGAAGATGCTGCGGGGCGGCTGGGCGATATTCCCGGGTTTGCGACCGTGGGCCTGCG
TGCGGGCTATGACTTTGGCAAGTCGCTGAGCAATCTGCGGGTGGCTGTGGGGGTCAAGAATCTGTTCGATCGCAGGTACT
ACACGCGGTCTACGGATAACAACGGGGGCAAGTATGTGGGGATGCCTCGGACGTTGTATGTGCAGGGGACGTTGCCGTTC
TGA

Protein sequence :
MVSSNHCATLTRCAAAVAAALLSLQASAQAPSPTTTAPEAGLSAITVTGNWLDNPTEEKVLDHAGARTIVERARIEETGS
SSLRDVLRLVPGVQVQDSNGTGGSDVSLNIGVRGLTARLSPRSYVLMDGVPVSYAPYGQPQLSLAPVSLGNLESVDVIRG
AGSVRYGPQNVGGIINFVTRAIPKTFAAEASVGTEIYSHGGNAKTTPSLFVGGTNESGLGLALLYSGTHGDGWRAGNDKT
DIDDILLKGAYRISAQDDIAVSLHHFEGSGRMPGGLTTAQYAADPFQSTRSYDSFDGRRTDASFKYNHKDGRNNFEVLGY
YVDSFRGSYIEQDNANQRRLTAAPRSYHYFGIEPRYSRLFETGSVVQEVSVGYRYLKESSSEVALRTAYYNPATMANAMA
LPITPYQTSQGGTTAHAFYIDDRIDIGNWTITPGVRYERINSFNNVSNLGADGSTVTSQLFPKADASEFLPTLSVLYRMN
AQWSLFANAGKSFGPQQYAQLAQTERGLHPESAKTYEVGTHYNSPALNAELTLFNIDFDKELLLTRVGVDGIWTDLGATR
HRGIESSLRYDLGQWNAALKGLTAGVSYTYTEAVSRAGDFAGRDLPLYSRHTGQLWARYALGQWTLNADLAAQSKQRSPG
SGTQYVTQEDAAGRLGDIPGFATVGLRAGYDFGKSLSNLRVAVGVKNLFDRRYYTRSTDNNGGKYVGMPRTLYVQGTLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 3e-137 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_2453 YP_001563476.1 TonB-dependent siderophore receptor VFG1047 Protein 2e-137 45