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Name : Daci_0300 (Daci_0300) Accession : YP_001561331.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Virulence Product : ImpA family type VI secretion-associated protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 338605 - 340989 bp Length : 2385 bp Strand : - Note : TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: aav:Aave_2735 rhs element Vgr protein DNA sequence : ATGACACGCAGAGTCACCATACACACGCCATTGGGCGAGCAGCTGCATTTCCGTGAATTGCGCGGCCAGGAAAACATCAG CCAACTCTTCAGCCTCGATGTGGAAATGCTCAGCGAAAGCGAAAGCATCGATCCCAAGGCCCTATTGGGTAAAAACGCCA CCATAGAAATAGAAACCCAGGGCGGCGGCAGGCGCTTCATCGACGGCATCGTCACCCGCTTCGGCATGCAGGGCCAGGAC CACCGCCACTACGCCTACAAGGCCCGCCTGAGCCCCTGGCTGTGGCTGGCCACGCGCAAGAGCGACTTTCGCATCTTCCA GAACCAGACCGTGCCCGACATCATCGAGCAGGTATTGGGCGTCTATGGCCATCCATTGCAAAGGAAACTCACGCGCGCCT ATCGCAGTTGGGATTACTGCGTGCAATACAACGAAAGCGATTGCGACTTTGTCTCGCGATTGATGGAGCACGAAGGCATC TACTACCACTTCGCGCATGCCATGGGAGAACACACCCTGGTGCTGTGCGACGACATCATTGCCTCGCACAGCGTATTGCC CGGGGGCGCCTCCATTCCCTTTTATCCCCCGGAAAAAGCCGCCGCAGGCGATCAGGAAAACATCCACGCCTGGCAGCTGG AGCAGGAAATCAAATCGGGCCGCCATTACAGCGACGACTACGACTTCAAGAAACCCCGGGCCGACCTCACCCACCTGCGG CGCGACCCGCCGGGCCACGCCCATGACGGCCACGAAATCTACGAATGGCCGGGCGGCTACACCCAGCTGAGCGACGGCGA GGACTACATCCGCGTGCGCCTGAAGGAAAGCCTCACGGGCCAAAGCCGGGTGCGGGGCCAGTCCTGCCACCGGGCGCTGG CCACGGGCTACACCTTCAGCCTCTACAACTATCCGCGCGGCGACCAGAACCAGCAGTACCTGATCACGGGCCTGAGCTAC CACTTGAAGGAGAATCCCCGCGTCAGTGCCGTGGCCCCGGGCGCCAAGGGCAGCGCCGCGGAAGACGGCTCCTTCCAGCG CTACGAGTTGCAGGCCCAGCCCACGAGTCTTGCCTACACCCCTGCGCGCACCACGCCCAAGCCGCGTACCACCGGCCCGC AGACCGCCGTCGTCGTGGGCCCGGCCGGAGAAGAAATCTGGACCGACGAATACGGCCGCATCAAGGTGCAATTCCACTGG GACCGCCTGGGCGCCATGAACGAGAACTCCAGCTGCTGGATCCGCGTGGCCACGAACTGGGCAGGCCCGGGGTTCGGGGC CATCTCCATTCCCCGCATAGGGCATGAAGTCGTCGTCGACTTCCTCAATGGCGACCCGGACTACCCGCTGGTCACGGGCT GTGTCTACAACGCGGCCAACATGCCGCCCTGGGCGCTGCCGGCCAACGCCACGCAATCGGGCATCAAGACCAGATCGAGC AAGGGCGGCGCACCGGGCGCCGGCATGAAGAACGGCCAGGGCGACGCCAACGCTATCCGCTTCGAGGACAAGGCGGGCGC AGAGCAGCTGTGGCTGCATGCCCAGAAGGACCAGCTCACCGAGGTCGAGAACGACGAGGACAAATGGGTGGGCAACGACA GGCGCAAGACCATCGACCGGGACGAGACCAGCGTCATCCACCGGGACCGCACGGAGACGGTGGACCGCAACGAGACCATC ACCGTGCACAACAACCGCACGGAGCGCGTGGACCACGACGAGAAGATCAGCATCGGCGACAACCGCAACGAAGACGTTGG CATCGACGAGAACATCTCCATCGGCAAGAACCGCAGCAAGACCATCGGCAAGACCGAGACCGACAAGATAGGCCAGAACT GGCACGTCACGGTGGGCCTGCTCAAGACCCAGACCATAGGCATGGCCTACATGCAGAACGTGGGTGTGATGAAGATGATG AACATCGGCGTCAACTACATGGAAAACATCGGCGTGGCCATGCAGACCACGGTCGGCATGAGCCAGAACCTCACCGTGGG GCAGGAGCGCCAGGTCAAGGTCGGCAGCAAGCAAAGCACGGAAGTGGGCTCGCAGTACTCGCTGACCGTGGGCGGTGGTG GTGGCGCGGGAGGCGGAGGCGGAGCCGGTGGCGGCATGGCCATGAACATCACGTCGCCCGGTGGCGGTGGCGGTGGCGGT GGCGGTGGTGGTGGTGGTGGTGGCGGCGGCAGCGGTGGGGGCGGTGGAGGCGGAGGTGGCAAGGCCTCCCAGCTCACCAT GGATGGGCAAAGCATTGAGCTCAACGCCGCCAAGATCCGGCTCGAAGCCCAGCAGGAAATCCTGCTGACCTGCGGCGAAA GCACCATCCGCATCACGCCCGGCGACATCCAGATTCTCTCGCCCACGGACCGGCTCAACTGCTGA Protein sequence : MTRRVTIHTPLGEQLHFRELRGQENISQLFSLDVEMLSESESIDPKALLGKNATIEIETQGGGRRFIDGIVTRFGMQGQD HRHYAYKARLSPWLWLATRKSDFRIFQNQTVPDIIEQVLGVYGHPLQRKLTRAYRSWDYCVQYNESDCDFVSRLMEHEGI YYHFAHAMGEHTLVLCDDIIASHSVLPGGASIPFYPPEKAAAGDQENIHAWQLEQEIKSGRHYSDDYDFKKPRADLTHLR RDPPGHAHDGHEIYEWPGGYTQLSDGEDYIRVRLKESLTGQSRVRGQSCHRALATGYTFSLYNYPRGDQNQQYLITGLSY HLKENPRVSAVAPGAKGSAAEDGSFQRYELQAQPTSLAYTPARTTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHW DRLGAMNENSSCWIRVATNWAGPGFGAISIPRIGHEVVVDFLNGDPDYPLVTGCVYNAANMPPWALPANATQSGIKTRSS KGGAPGAGMKNGQGDANAIRFEDKAGAEQLWLHAQKDQLTEVENDEDKWVGNDRRKTIDRDETSVIHRDRTETVDRNETI TVHNNRTERVDHDEKISIGDNRNEDVGIDENISIGKNRSKTIGKTETDKIGQNWHVTVGLLKTQTIGMAYMQNVGVMKMM NIGVNYMENIGVAMQTTVGMSQNLTVGQERQVKVGSKQSTEVGSQYSLTVGGGGGAGGGGGAGGGMAMNITSPGGGGGGG GGGGGGGGGGSGGGGGGGGGKASQLTMDGQSIELNAAKIRLEAQQEILLTCGESTIRITPGDIQILSPTDRLNC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 2e-95 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Daci_0300 | YP_001561331.1 | ImpA family type VI secretion-associated protein | VFG2077 | Protein | 6e-109 | 46 |
