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Name : Daci_4483 (Daci_4483) Accession : YP_001565497.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Virulence Product : ImpA family type VI secretion-associated protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 4904968 - 4907304 bp Length : 2337 bp Strand : - Note : TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: aav:Aave_2735 rhs element Vgr protein DNA sequence : ATGACACGCCGAGTCACCATACACACGCCATTGGGCGAGCAGCTGCATTTCCGTGAATTGCGCGGCCAGGAAAACATCAG CCAACTCTTCAGCCTCGATGTGGAAATGCTCAGCGAAAGCGAAAGCATCGATCCCAAGGCCCTATTGGGTAAAAACGCCA CCATAGAAATAGAAACCCAGGGCGGCGGCAGGCGCTTCATCGACGGCATCGTCACCCGCTTTGGCATGCAGGGCCAGGAC CACCGCCACTACGCCTACAAGGCCCGCCTGAGCCCCTGGCTGTGGCTGGCCACGCGCAAGAGCGACTTTCGCATCTTCCA GAACCAGACCGTGCCCGACATCATCGAGCAGGTATTGGGCGTCTATGGCCATCCCCTGCAAAAGAAACTCACGCGCGCCT ATCGCAGCTGGGACTACTGCGTTCAATACAACGAAAGCGATTGCGACTTTGTCTCGCGATTGATGGAGCACGAAGGCATT TACTACTTCTTCGAGCATGCCTCGGGCCAGCACACCCTGGTGCTGTGCGACGACATCATTGCCTCGCACAGCGTATTGCC CGGGGGCGCCTCCATTCCCTTTTATCCCCCGGAAAAAGCCGCTGCAGGCGATCAGGAAAACATCCACGCCTGGCAGCTGG AGCAGGAAATCAAACCAGGCCGCCATTACAGCGACGACTACGACTTCAAGAAGCCCCGGGCCGACCTCACCCACCTGCGG CGCGACCCGCCGGGCCACGCCCATGACGGCCATGAAATCTACGAATGGCCGGGCGGCTACACCCAGCTGAGCGACGGCGA GGACTACATCCGCGTGCGCCTGAAGGAAAGCCTCACGGGCCAAAGCCGGGTGCGGGGCCAGTCCTGCCACCGGGCGCTGG CCACGGGCTACACCTTCAGCCTCTACAACTACCCGCGCGGCGACCAGAACCAGCAGTACCTGATCACGGGCCTGAGCTAC CACTTGAAGGAGAACCCCCGCGTCAGTGCCGTGGCCCCGGGCGCCAAGGGCAGCGCCGCGGAAGACGGCTCCTTCCAGCG CTACGAGTTGCAGGCCCAGCCCACGAGTCTTGCCTACACGCCCGCGCGCACCACGCCCAAGCCGCGCACCACGGGCCCGC AGACCGCCGTCGTCGTGGGCCCGGCCGGAGAAGAAATCTGGACCGACGAATACGGCCGCATCAAGGTGCAGTTCCACTGG GACCGCCTGGGCGCCATGAACGAGAACTCCAGCTGCTGGATCCGCGTGGCCACGAACTGGGCAGGCCCGGGGTTCGGGGC CATCTCCATTCCCCGCATAGGGCATGAAGTCGTCGTCGACTTCCTCAATGGCGACCCGGACTACCCGCTGGTCACGGGCT GCGTCTACAACGCGGCCAACATGCCGCCCTGGGCGCTGCCGGCCAACGCCACGCAATCGGGCATCAAGACAAGATCGAGC AAGGGCGGTGCCGCAGGCGCGGGCCTGAAGAACGGCCCGGGCGACGCCAACGCCATCCGCTTCGAGGACAAGGCGGGCGC CGAACAGCTGTGGCTGCACGCGCAAAAGGACCAGCTCACCGAAGTCGAGAACGACGAGGACAAATGGGTGGGCAACGACC GGCGCAAGACCATCGACCGCGACGAGACCAACATCATCCACCGGGACCGCACCGAGACCGTGGACCGCGACGAGACCATC ACCGTGCACAACAACCGCACGGAGCGAGTGGACCACAACGAGAAGATCAGCATTGGCGACAACCGCAACGAGGATGTCGG CATCGACGAGAACATCTCCATCGGCAAGAACCGCAGCAAGACCGTTGGCAAGACCGAGACCGACAAGATAGGCCAGAACT GGCACGTCACGGTGGGCCTGCTCAAGACCCAGACCATAGGCATGGCCTACATGCAGAACGTGGGTGTGATGAAGATGATG AACATCGGCGTCAACTACATGGAGAACATCGGCGTGGCCATGCAGACCACGGTCGGCATGAGCCAGAACCTCACTGTGGG GCAGGAGCGCCAGGTCAAGGTCGGCAGCAAGCAAAGCACGGAAGTGGGCTCGCAGTACTCGCTGACCGTGGGCGGTGGTG GTGGCGCGGGAGGCGGAGGCGGAGCCGGTGGCGGCATGGCCATGAACATCACGTCGCCCGGCAGCGGTGGGGGCGGTGGA GGCGGAGGTGGCAAGGCCTCCCAGCTCACCATGGATGGGCAAAGCATTGAGCTCAACGCCGCCAAGATCCGGCTCGAAGC CCAGCAGGAAATCCTGCTGACCTGCGGCAAAAGCACCATCCGCATCACGCCCGGCGACATCCAGATTCTCTCGCCCACGG ACCGGCTCAACTGCTGA Protein sequence : MTRRVTIHTPLGEQLHFRELRGQENISQLFSLDVEMLSESESIDPKALLGKNATIEIETQGGGRRFIDGIVTRFGMQGQD HRHYAYKARLSPWLWLATRKSDFRIFQNQTVPDIIEQVLGVYGHPLQKKLTRAYRSWDYCVQYNESDCDFVSRLMEHEGI YYFFEHASGQHTLVLCDDIIASHSVLPGGASIPFYPPEKAAAGDQENIHAWQLEQEIKPGRHYSDDYDFKKPRADLTHLR RDPPGHAHDGHEIYEWPGGYTQLSDGEDYIRVRLKESLTGQSRVRGQSCHRALATGYTFSLYNYPRGDQNQQYLITGLSY HLKENPRVSAVAPGAKGSAAEDGSFQRYELQAQPTSLAYTPARTTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHW DRLGAMNENSSCWIRVATNWAGPGFGAISIPRIGHEVVVDFLNGDPDYPLVTGCVYNAANMPPWALPANATQSGIKTRSS KGGAAGAGLKNGPGDANAIRFEDKAGAEQLWLHAQKDQLTEVENDEDKWVGNDRRKTIDRDETNIIHRDRTETVDRDETI TVHNNRTERVDHNEKISIGDNRNEDVGIDENISIGKNRSKTVGKTETDKIGQNWHVTVGLLKTQTIGMAYMQNVGVMKMM NIGVNYMENIGVAMQTTVGMSQNLTVGQERQVKVGSKQSTEVGSQYSLTVGGGGGAGGGGGAGGGMAMNITSPGSGGGGG GGGGKASQLTMDGQSIELNAAKIRLEAQQEILLTCGKSTIRITPGDIQILSPTDRLNC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 9e-97 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Daci_4483 | YP_001565497.1 | ImpA family type VI secretion-associated protein | VFG2077 | Protein | 7e-109 | 46 |
