Gene Information

Name : SARI_01564 (SARI_01564)
Accession : YP_001570600.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1886
EC number : -
Position : 1518110 - 1519078 bp
Length : 969 bp
Strand : -
Note : 'COG: COG1886 Flagellar motor switch/type III secretory pathway protein; Psort location: cytoplasmic, score: 23'

DNA sequence : 
ATGTTAACAATAGCGAATGAAGAGCGCCCGTGGATGGATATACTCCCAACAGAAGGGGCTACCATTGGGGAGCTGACATT
GCGTATGCAAGAATATCCGGTACAGGAAGGGATATTATTTACTATAAATTATAATAATGAGCTGGGTAGGGTATGGATTG
CAGAACAATGCTGGCTGCGCTGGTGTGAAGGGTTAATTGGCACAGCTAATCGATCAGCGATTGATCCTGAATTGCTATAT
GGAATAGCTGAATGGGGGCTGGCACCGTTATTGCAAGCCAGTGATGCGACACTTTGTCAGAAAGAGCCTCCAACATTTTG
CAGTAATGTACCACATCAGCTAACGCTGAACATCAAATGGATAGTTGAGGAACATGAATTCCATAGCATTATTTTTAAGT
GGCCAACTGCGTTTTTGCAAAATATAGTCGGAGAGCTTTCTGCCGAGCGTCAACAGATTTATCCTGCTCCTCCAATAGTG
GTTCCTGTATATTTAGGTTGGTGCCACCTTACGTTAACTGAACTTGAGTCTATTGAAATTGGAATGGGCATTCGGATTCA
TTGCTTTGGTGATGTCAGAATTGGTTGTTTTGTTATCCAATTACCTGGACGTATCTATGCCAGGGTGTTGCTAACAGAGG
ATAATATGATGAAATTTGATGAGTTAGTACAAGATATCGAAACGTTGCTTGCGCAAGAGGGGCCTATTTTAAAGAGTGAC
ATAGCGTCTTCAGTCGAACTGGAGCAGTTACCGCAAAGTGTGCTCTTTGAGATCGGTCGTGCGAGCGTAGAAATTGGACA
ATTACGACAACTTAAAGCGGGTGACGTTTTGCCTGTAGGTGGGTGCTTTGCGCCAGAGGTAACGATAAGGTTAAATGGCC
GTGTTATCGGGCAAGGTGAGCTGATTGCCTGTGGGAATGAATTCATGGTGCGTATTACACGTTGGTATCTAAGCAAAAAT
ACAGTGTAA

Protein sequence : 
MLTIANEERPWMDILPTEGATIGELTLRMQEYPVQEGILFTINYNNELGRVWIAEQCWLRWCEGLIGTANRSAIDPELLY
GIAEWGLAPLLQASDATLCQKEPPTFCSNVPHQLTLNIKWIVEEHEFHSIIFKWPTAFLQNIVGELSAERQQIYPAPPIV
VPVYLGWCHLTLTELESIEIGMGIRIHCFGDVRIGCFVIQLPGRIYARVLLTEDNMMKFDELVQDIETLLAQEGPILKSD
IASSVELEQLPQSVLFEIGRASVEIGQLRQLKAGDVLPVGGCFAPEVTIRLNGRVIGQGELIACGNEFMVRITRWYLSKN
TV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaQ NP_456110.1 putative type III secretion protein Virulence SPI-2 Protein 1e-125 87
ssaQ NP_805089.1 type III secretion system protein Virulence SPI-2 Protein 1e-125 87
ssaQ CAA70540.1 secretion system apparatus Virulence SPI-2 Protein 1e-85 87
ssaQ NP_460383.1 type III secretion system protein Virulence SPI-2 Protein 2e-124 86
ssaQ YP_216426.1 type III secretion system protein Virulence SPI-2 Protein 6e-125 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01564 YP_001570600.1 type III secretion system protein VFG0518 Protein 1e-124 86