Gene Information

Name : SARI_01908 (SARI_01908)
Accession : YP_001570933.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0642
EC number : -
Position : 1832476 - 1833834 bp
Length : 1359 bp
Strand : +
Note : 'KEGG: sty:STY1127 5.1e-215 copS; histidine kinase K07644; COG: COG0642 Signal transduction histidine kinase; Psort location: endoplasmic reticulum, score: 9'

DNA sequence :
ATGGTTAAATTATCAATGACGCTGCGCCTGACAATTTCTTTTATCGCCATACTTATCCTCGCCTGCACCGGCATTAGCTG
GACGCTTTATAGAGCGTTGAGCAAAGAATTAACATATCGGGATGATATGACGCTAATAAACCGGGCGGCGCAAATGCAGC
AACTGTTGCTGGATGGCGCCAGACCGGAAAATCTGCCGCTCTATTTTAACCGGATGGTGGATACGAAACAGGATATCTTG
TTGATTCATTCACCAACAGGTCACAGTGTTGCGATTAACCATAGCGGCATCCCCAATGAACGCCTGAACATGATTCCGCT
CGCTAAAAACATAACCCGCGAAACCTTATTTCGCCAGACGGTACGAGGAACGGAGCTGACCGCAGTACGGGTCATCGGCA
GAAGCGGCGATTACCCGTTGACCCTGACCATTGCCAGGCTGGCGACGGAAAGGCGACAAATGCTGGAGCAATATCGTCAC
AACAGTTTACTGATAAGTCTTATTGCGATCATCGTCTGTTCGGCGCTCAGTCCGTTGGTCATTAGAAATGGATTACGAGC
CATTACGTCGCTCAGCCGGCTCACAGCGGCGACAGATAGTGGCACACTCCGCCAGCCACTGGCGGAACAGGCGTTGCCCG
TCGAGCTAAGGCCGCTTGGGCAAGCGCTAAATATCATGCGCCAGAAGCTTTCCGACGATTTTGGACGCCTGAACCAATTT
GCCGACGATCTAGCGCACGAGCTGCGCACGCCGGTCAATATTCTATTGGGGAAAAATCAGGTGATGTTGAGTCAGGAACG
CAGCATCGAAGAGTATCAACAAGCCCTTGTCGATAATATTGAAGAGCTGGAGGGACTGTCGCGACTGACAGAAAATATTC
TCTTTCTGGCGCGCGTGGAGCACCAGAATATAGCGGTAAAAAAACAACCTGTTCCGCTAAATGCGCTGGTCGAAAATATG
CTCGATTATCTTAGTCCTCTTGCCGAGGAGAAGCGCATCCGTTTTATAAGTCAATGTCAGGGAACGGTGTGGGCTGATAA
AATATTATTACAAAGAGTGCTTTCAAACCTCTTGACGAATGCCATCCGGTATTCTGATGAAAACGCCGTGATACGTATTG
AAAGCGCTTATGATAATAACGCTGCGGAAATTCGGGTCGCTAATCCGGGAAACCCTGCCGCCGATCCGGGCAAACTTTTC
AGGCGTTTTTGGCGAGGAGATAATGCCCGCCACACCACCGGTTTTGGTCTGGGATTATCGCTGGTTAACGCGATTGCAAT
GTTGCACGGCGGCTCTGCGTCTTACCTCTATGCCGATAAACACAATATCTTTTCGGTTCGTCTGCCTGATAACGGTTGA

Protein sequence :
MVKLSMTLRLTISFIAILILACTGISWTLYRALSKELTYRDDMTLINRAAQMQQLLLDGARPENLPLYFNRMVDTKQDIL
LIHSPTGHSVAINHSGIPNERLNMIPLAKNITRETLFRQTVRGTELTAVRVIGRSGDYPLTLTIARLATERRQMLEQYRH
NSLLISLIAIIVCSALSPLVIRNGLRAITSLSRLTAATDSGTLRQPLAEQALPVELRPLGQALNIMRQKLSDDFGRLNQF
ADDLAHELRTPVNILLGKNQVMLSQERSIEEYQQALVDNIEELEGLSRLTENILFLARVEHQNIAVKKQPVPLNALVENM
LDYLSPLAEEKRIRFISQCQGTVWADKILLQRVLSNLLTNAIRYSDENAVIRIESAYDNNAAEIRVANPGNPAADPGKLF
RRFWRGDNARHTTGFGLGLSLVNAIAMLHGGSASYLYADKHNIFSVRLPDNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copS NP_460068.1 copper resistance protein Not tested SPI-5 Protein 0.0 92
copS AAC33720.1 histidine kinase Not tested SPI-5 Protein 0.0 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01908 YP_001570933.1 hypothetical protein VFG0595 Protein 0.0 92