Gene Information

Name : SARI_00842 (SARI_00842)
Accession : YP_001569903.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 860152 - 860427 bp
Length : 276 bp
Strand : -
Note : 'COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; Psort location: cytoplasmic, score: 23'

DNA sequence : 
ATGAATAACGCACTAGGACTGGTTGAAACAAAGGGGCTGGTCGGCGCCATTGAAGCCGCTGATGCCATGGTGAAATCTGC
CAATGTGCAACTGGTTGGCTATGAAAAAATTGGCTCCGGTCTCGTCACCGTTATGGTTCGCGGCGATGTCGGCGCGGTGA
AAGCAGCCGTTGATGCGGGCAGCGTCGCGGCAAGCGCGGTAGGCGAAGTGAAATCCTGCCATGTTATTCCGCGTCCGCAT
AGCGACGTTGAGGCTATTTTACCTAAATCCGCCTGA

Protein sequence : 
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSVAASAVGEVKSCHVIPRPH
SDVEAILPKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-13 68
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-12 67
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_00842 YP_001569903.1 hypothetical protein VFG1596 Protein 2e-13 68
SARI_00842 YP_001569903.1 hypothetical protein VFG1598 Protein 6e-13 67
SARI_00842 YP_001569903.1 hypothetical protein VFG1597 Protein 9e-13 65