Gene Information

Name : lhv_1774 (lhv_1774)
Accession : YP_001577945.1
Strain : Lactobacillus helveticus DPC 4571
Genome accession: NC_010080
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1742853 - 1743602 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGAAATTCTTGTGGTTGACAACGTCACCAAAACTTATGGTAAAAAAGGCGAAAAACAATACCGAGCTTTAAAGGG
CATCAATTTTAAGGTTGCTGCTGGTGAATTCGTAGCAATTATGGGTGCTTCTGGTTCAGGTAAGACTACCTTGCTTAACA
TTCTTTCAACTTTGGATAAACCAACCACTGGTCAAGTTTTCATTAATGCACATGATGTCAGCACCTTGAATACTAATCAG
ATGGCCGACTTCCGTAGCAAAGAAATTGGTTTTATTTTCCAAGACTTCAACTTGCTAGAAAATTTGTCTAATCGTGAAAA
TATTGCATTGCCACTTAGCTTGCGCGGATTATCAGCACGCAGAATTAATCCGCTTGTGGATAAGATCGCAGCTAAGTTGG
GGATCAAAGAAATCTTGAATAAATATCCCGCAGAAATTTCTGGTGGACAAAAGCAAAGAGTAGCTTCGGCACGTGCCTTG
GTTCACGAACCAGCTATCTTGCTCGCCGATGAACCAACTGGCGCGCTTGATTCTAAGAGTGCAAGAGAATTGTTGAACAC
AATGGAAAACTTAAATAAGCATGACGGTGTAACGACTTTGATGGTTACCCACGATCCATTTTCAGCAAGTTTTGCCAATC
GTATTTTATTTATCAAAGACGGTAAGATCGGTGAACAAATGATTAAGGGGCAAAAATCTAGAACGGACTTCTACCATGAA
TTAATTGCTCACTTAGGTACTGAAGAATAG

Protein sequence : 
MNEILVVDNVTKTYGKKGEKQYRALKGINFKVAAGEFVAIMGASGSGKTTLLNILSTLDKPTTGQVFINAHDVSTLNTNQ
MADFRSKEIGFIFQDFNLLENLSNRENIALPLSLRGLSARRINPLVDKIAAKLGIKEILNKYPAEISGGQKQRVASARAL
VHEPAILLADEPTGALDSKSARELLNTMENLNKHDGVTTLMVTHDPFSASFANRILFIKDGKIGEQMIKGQKSRTDFYHE
LIAHLGTEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lhv_1774 YP_001577945.1 ABC transporter NC_012469.1.7686878. Protein 1e-46 44
lhv_1774 YP_001577945.1 ABC transporter CP001581.1.gene598.p Protein 1e-38 43
lhv_1774 YP_001577945.1 ABC transporter NC_008702.1.4606598. Protein 1e-35 43
lhv_1774 YP_001577945.1 ABC transporter CP001581.1.gene798.p Protein 2e-37 41