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Name : secD (COXBURSA331_A1291) Accession : YP_001597015.1 Strain : Coxiella burnetii RSA 331 Genome accession: NC_010117 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1165144 - 1167012 bp Length : 1869 bp Strand : - Note : identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129 DNA sequence : ATGAATCGATATCCGTTGTGGCGTTATATATTACTCGCCGTACTCATCATCATCAGTTTGATTTATGCGTTACCTAACTT GTATGGGGAAGATCCGGCTATTCAAATCTCAGCTAAGAATAGTGCTCCCATTGAGGCTGTTGAAGAAAAAATCAAATCAA CCTTAAACGCTCAACATATTTCTTATCTTTCGGTTCGGCCTGTCGATAATACCGTTTTGGTTCGCTTTCCCAGTACCGAA GATCAGCTTAAAGCGCAGGATGTGATTCAGGCTGTCGTTGGTACTGATTATTCCGTTGCATTGAATTTAGCGCCGCGGAC GCCCCGATGGTTACAGGCGATCGGCGCAAAACCGATGCGCTTAGGATTGGACCTGCGCGGCGGTATCCATTTCTTATTAG ATGTGGATGTTGGCGCCATGGTGAAAGCCCAGGAAACGGGCGATTTACATACCATGTCAACGGCGCTTCGCGAAGCCCGC ATTCGCTATACAGAGATGTCAAGCGACCAAAATGGCGTAATGATCCATTTCCGTGACCAAGCAGCCCGTGATCAGGCGCG CACGCTCTTGGAAAAACAATTTCCTGACTACCGTTTTGAAGCCACGGCATCGAGTCTTCGAGGCACTATTTCAATAACGG CATTGCACCAAATCCAGCAAAATGCCGTGGATCAAATAACAACGATCCTCAGAAACCGTGTTAATGAGTTAGGCGTTGCG GAACCGGTTATCCAACAGCAAGGAGAAAGCCAAATCAGCGTTGATTTGCCTGGCATTCAAGACACGGCTCGAGCCAAAGA TATTATTGGTAAAGTAGCGACCATTCGTTTGCAATTGGTGGATGTTGAACACGATGCTGAAACAGCCTCGAGCACGGGGA CTGTGCCTTTTGGTTCAAAATTATATACCTTCGAAAAGCAGCCCGTACTATTGAAGCAGCAGGTCGTGTTAAAAGGAACT TCGATTATTAACGCCTCGAGTGTTATTGGAGAAGATGGCCGCCCAGCGGTGCGAGTTCGGGTGAGTGGCAGCGATGTGCC TTCTTTTAATCGAATTACGGGGGAAAACGTCGGCAAACCTTTAGCCGTTGTTTACGTAGAAACTCAAACTACGCGTCATT TAGTCGATGGAAAGGTGGTGACTCAACACCGCCAAATTGAGCGTATTATTAATATAGCGACGATTCAAACTGCTCTTGGA AATGATTTCCAAATAACTAACTTATCTACGATGGATTACGCAAAAAATTTAGCCTTGTTATTACGCTCTGGCGCTTATCC TGTCCCCGTTGATTTTGTGCAAGAACGAGTGGTGGGCCCGAGTTTGGGCCAAGAAAATATCCACATGGGGGTTTTATCTA CCGAAATTGGCGCTTTATTGGTGATTGTGTTTATGGCGTTCTACTATCGGCTGTTCGGCGTCATTGCTGACATCGCGTTA GCTTTGAATATCGTCTTTATTGTTGCGGTGTTATCCATTTTGGGTGCTACCCTCACTTTGCCCGGTATTGCGGGTATTGT GTTAACAGTGGGGATGGCTGTCGATGCGAATGTGTTAATTAACGAGCGAATACGAGAAGAGTTGCGCAATGGGATGTCGC CGCAAGCGAGTATCAAAGCTGGATACGATCGGGCTTTTGCTACCATTGTGGATGCCAATGTGACCACGCTGATTGTAATG ATTATCTTATTTGCTTTAGGCTCGGGGCCAGTCCAAGGCTTTGCTGTGACGACGACTATTGGTTTGTTGTCGTCGATGGT GACAGCGATTTTCTTTACACGGGCGGTGGTGAATTTAGTGTACGGACGGCGCAGAGCTTCACGTTTGTCTATTGGGATTA ACGCAAAATCCGCAGAGGCTAAGAAGTAA Protein sequence : MNRYPLWRYILLAVLIIISLIYALPNLYGEDPAIQISAKNSAPIEAVEEKIKSTLNAQHISYLSVRPVDNTVLVRFPSTE DQLKAQDVIQAVVGTDYSVALNLAPRTPRWLQAIGAKPMRLGLDLRGGIHFLLDVDVGAMVKAQETGDLHTMSTALREAR IRYTEMSSDQNGVMIHFRDQAARDQARTLLEKQFPDYRFEATASSLRGTISITALHQIQQNAVDQITTILRNRVNELGVA EPVIQQQGESQISVDLPGIQDTARAKDIIGKVATIRLQLVDVEHDAETASSTGTVPFGSKLYTFEKQPVLLKQQVVLKGT SIINASSVIGEDGRPAVRVRVSGSDVPSFNRITGENVGKPLAVVYVETQTTRHLVDGKVVTQHRQIERIINIATIQTALG NDFQITNLSTMDYAKNLALLLRSGAYPVPVDFVQERVVGPSLGQENIHMGVLSTEIGALLVIVFMAFYYRLFGVIADIAL ALNIVFIVAVLSILGATLTLPGIAGIVLTVGMAVDANVLINERIREELRNGMSPQASIKAGYDRAFATIVDANVTTLIVM IILFALGSGPVQGFAVTTTIGLLSSMVTAIFFTRAVVNLVYGRRRASRLSIGINAKSAEAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-108 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-108 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-108 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-108 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-108 | 43 |
