Gene Information

Name : lolD (sce1112)
Accession : YP_001611749.1
Strain : Sorangium cellulosum So ce 56
Genome accession: NC_010162
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1564586 - 1565272 bp
Length : 687 bp
Strand : +
Note : Family membership

DNA sequence : 
ATGGCTGATCCGCTGCTCGTCGTCGAAGGCGTGGTGAAGGAATACGGCCAGGCCGTCGTCTCGCGCGCGCTCGACGGCGT
CGATCTCCGGATCGAGAAGGGCGAGTTCGCCGCGCTGATCGGCCCGTCGGGCTCGGGCAAGAGCACCCTTCTCAACATCA
TCGGCCTGCTCGACCGGCCGACGCGCGGGCGCGTGGTGGTCGACGGCAAGGACACGACGGGGCTCGACGAGGCGAGCCTC
ACCCGGCTTCGCGCGCGGACGCTCGGCTTCGTGTTCCAGTTCCATCACCTCTTGCCGATGTTCACCGCGCTCGAGAACGT
GATGCTGCCCGCCTGGGGCGACGAGGGATTCCCTTCGTCGGCCATGAAGGAGCGCGCGGTCGAGCTGCTCGGAGCGGTGG
GGCTCGCCGACCGGATGAACTTCAGGGCGACCGCGCTCTCGGGCGGCCAGCAGCAACGCGTGGCCATCGCGCGTGCGCTG
TCGCGCCGACCGCCGCTCGTCCTCGCCGACGAGCCGACAGGGAACCTCGACACCGAGTCTTCGGCCGAGGTCTTCGCGCT
GATGCGCCGGTTCAACCGCGAGCTCGGCACGACGTTCCTCGTCGTCACGCACGATCCGCGCATCGCCGAGCAGTGCGAAC
GCGTGATCGAGATCGTCGACGGGCGCATCGCCAGCGACCGCGCATGA

Protein sequence : 
MADPLLVVEGVVKEYGQAVVSRALDGVDLRIEKGEFAALIGPSGSGKSTLLNIIGLLDRPTRGRVVVDGKDTTGLDEASL
TRLRARTLGFVFQFHHLLPMFTALENVMLPAWGDEGFPSSAMKERAVELLGAVGLADRMNFRATALSGGQQQRVAIARAL
SRRPPLVLADEPTGNLDTESSAEVFALMRRFNRELGTTFLVVTHDPRIAEQCERVIEIVDGRIASDRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_001611749.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-36 47
lolD YP_001611749.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-28 47
lolD YP_001611749.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-39 45
lolD YP_001611749.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 9e-40 43