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Name : glcD (Bpet2736) Accession : YP_001631346.1 Strain : Bordetella petrii DSM 12804 Genome accession: NC_010170 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 2870156 - 2871655 bp Length : 1500 bp Strand : - Note : - DNA sequence : ATGAATTCACTGGTCGAACCGAACCTTAGTCACACCCAGCAGCCGTTTTCCGCGAAGCAGGTCATCGATGCGCTGCATGC CGTGCTGCCTGCGCACTGCGTGTTGCACCGCGAAGAAGATACCCGTCCATACGAGTGCGATGGCCTGTCGCTGTACCGCG CGCTGCCGCCGGTGGTGGCCCTGCCCGAGACCGAAGAACAGGTCATCGCGGTACTGCGCCTGTGCAAGCGGCTGAATGTG CCGCTGGTGGCGCGCGGCGCCGGCACGGGCTTGTCCGGCGGCGCCTTGCCGCACGCGCAAGGTGTGCTGATGGGCCTGGC CAAGTTCAACCGCATCCGGCGCATCGACCCGGCCAGCGGCACGGCAGTGGTCGAACCGGGCGTGCGCAACCTGGCTATTT CCGAGGCGGCCGCGCCTTACGGGCTGTACTACGCGCCCGATCCTTCCAGCCAGATCGCCTGCTCCATCGGCGGCAACGTG GCCGAGAACTCCGGCGGCGTGCATTGCCTGAAGTACGGCCTTACCGTGCACAACGTGCTGCGCGTGCGCGTGGTCACCAT CGATGGGGAAGTGGTCGAACTGGGCTCCGAAGCGCCCGATGCGCCGGGGCTGGACTTGCTGTCGGTGTTCATCGGGTCCG AGGGCATGCTGGGCGTGGTAACCGAGATTACCGTCAAGCTCATTCCCAAGCCGGCCTGCGCGCAGGTGATCATGGCCAGC TTTTCCAGCGCCGAGGCCGCAGGCCAGGCGGTCACCGATGTCATTGCGGCGGGCATCATCCCGGCAGGCCTCGAAATGAT GGACCGCCAGGCAGTGCAGATGGTCGAACCCTTCGTCAACGCGGGCTACGACGTTTCCGCGCAGGCCATCTTGCTGTGCG AATCGGATGGCACGGCCGAAGAAGTGGCGCACGAAATCCAGCACATGGAGGCCGTGTTCCGCAAGGCCGGCGCCACGCGC CTGCAGGTGTCGCGCGACGAGGCCGAACGGCTCAGGTTCTGGGCGGGGCGCAAGAATGCGTTTCCCGCGGCCGGGCGCGT GTCGCCCGACTATTACTGCATGGACGGCACCATTCCGCGCCGCCATCTGGCGCGCGTGCTGGGAGCCATCGAGCAGATGG AAGATGAATTCGGGTTGCGTTGCGCCAACGTGTTCCACGCGGGCGACGGCAACCTGCATCCGCTGATTCTGTTTGACTCG AACAAGCCCGACGAAGTCGAGCGGGCGGAAAAATTCGGCGCAGCCATTCTCGAGCTGTGCGTGCAGGTCGGAGGCACCCT GACAGGTGAGCACGGGGTGGGTATGGAGAAAATAAATCAAATGTGTGTGCAATTTACGCGCGATGAACTGGACGCGTTCC TGGCCGTGAAGCGGGCATTCGATCCGCCCGGGCTGTTGAACCCTGAAAAGGTGATTCCCACCCTGGCGCGTTGCGCGGAA TACGGCAAGATGCACGTGCACGCCGGAGAAATGAGCTTTCCCGACCTGGCTCGCTTTTAA Protein sequence : MNSLVEPNLSHTQQPFSAKQVIDALHAVLPAHCVLHREEDTRPYECDGLSLYRALPPVVALPETEEQVIAVLRLCKRLNV PLVARGAGTGLSGGALPHAQGVLMGLAKFNRIRRIDPASGTAVVEPGVRNLAISEAAAPYGLYYAPDPSSQIACSIGGNV AENSGGVHCLKYGLTVHNVLRVRVVTIDGEVVELGSEAPDAPGLDLLSVFIGSEGMLGVVTEITVKLIPKPACAQVIMAS FSSAEAAGQAVTDVIAAGIIPAGLEMMDRQAVQMVEPFVNAGYDVSAQAILLCESDGTAEEVAHEIQHMEAVFRKAGATR LQVSRDEAERLRFWAGRKNAFPAAGRVSPDYYCMDGTIPRRHLARVLGAIEQMEDEFGLRCANVFHAGDGNLHPLILFDS NKPDEVERAEKFGAAILELCVQVGGTLTGEHGVGMEKINQMCVQFTRDELDAFLAVKRAFDPPGLLNPEKVIPTLARCAE YGKMHVHAGEMSFPDLARF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 6e-154 | 62 |
