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Name : ccmF (Bpet4070) Accession : YP_001632686.1 Strain : Bordetella petrii DSM 12804 Genome accession: NC_010170 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4300315 - 4302285 bp Length : 1971 bp Strand : + Note : - DNA sequence : ATGATCCCCGAACTCGGGTTGCTGTCGCTGGCCCTGGCGCTTTGTCTGGCCGCGGTGCAGGCCAGCCTGCCCCTGGCGGG AGCCTGGCGCGGCAACCCGCGCTGGATCGCGCTGGCCGCACCGACTGCGTGGGGCCAGTTCACTTTCCTGCTGCTGGCGT TCGCGGCGCTTGCGCACGCTTTCCTGGGCGACGACTTCTCGGTGGCGTACGTGGCCCGCAATGCCAACAGCGCCCTGCCC TGGTACTACAAATTCAGCGCCATCTGGGGCGCACATGAAGGCTCGCTGCTGCTGTGGGCGTTGCTGCTGGCGGGCTGGTC TTGTGCCGTATGCGTGGGCTCGCGCCAATTGCCCCGCACCATGCGGGCCCGCGTGCTGGCGGTCATGGGCATGATCAGCG TGGGGTTCCTGCTGTTTCTCATCGCCACCTCGAATCCTTTCGAACGTCTGCTGCCCGATGTTCCTGCCGACGGCAACGAC CTCAACCCGTTGCTGCAGGACTTCGGCCTCATCGTGCACCCTCCCATGCTCTATATGGGCTATGTCGGCTTCTCCGTAGC CTTCGCGTTCGCCATTGCCGCGCTGCTCGACGGCCGGCTCGACGCCGCATGGGCGCGCTGGTCGCGGCCCTGGACACTGG TCGCCTGGGCCTTCCTGGGACTGGGCATCGCGCTGGGGTCGTGGTGGGCCTATTACGAGCTGGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTCGAGAACGCCTCGTTCATGCCATGGCTGGTGGGCACGGCCCTGATTCATTCCCTGGCCGCCACCGA GAAGCGCGGCGTCTTCAAGAGCTGGACGGTGCTGCTTGCCATTGCCGCGTTTTCGCTGAGCCTGCTGGGCACGTTCCTGG TGCGCTCGGGCGTGCTGACCTCGGTGCACGCCTTTGCCACCGACCCGGCGCGTGGCGTGTTCATTCTGTGCTTCCTGCTG GTGGTGGTGGGTGGCTCGCTGGCTTTGTTCGCCTTGCGCGCGCCGGCAGTGGCCAGCGCAGCCAGCTTCGGCACGTGGTC GCGCGAAACCCTGTTGCTGATCAACAACCTGCTGCTGTCCGTGGCCGCGGCCATGATCCTGCTAGGCACGCTGTATCCGC TGGTGCTCGACGCGCTGACCGGCGCCAAGCTGTCGGTCGGCCCCCCTTATTTCAACGCTTTGTTCGTGCCGCTGATGGCG CTGCTGATGGCGGCCACCGCGCTGGGCGTCGCCGCGCGCTGGAAAGACACCCCGCCGCGCTGGCTGGCGGGCATGCTGGG GCCCGTGCTGGCAGCCAGCCTCGCGTTCGCCGCCGGCGCGGCCGCGCTGGCGCGCGATTCGCGTTGGACAGTCGGGGCCG TATGCCTGCTGGCCGCCTGGATCGTGCTGGGCGCCTTGCGCGACATTGTCGACAAGACCCGCCACCTGGGCCTGCGGCGC GGTCTGCCGGCCCTGGGACGCAGCTACTGGGGTATGCAACTGGCGCACCTGGGGCTGGCCATGTGCGCGCTGGGCGTGGT GCTCAACAGCGCAGGCAACCTCGAACGCGACCTGCGCATGGCGCCCGGCGATGCCGTGGAACTCGGCGGCTACCGGTTCG TATTCGAGGGCACGACGGCACGCCCTGGCCCGAACTTCGTCGCCGAGCGCGGCACCATGCAGATCTTGCGCGACGGACGG CACGTTGCCACGCTGCACCCCGAAAAACGCGTGTACCACGCGCAACAGAACGCCATGACCGAAGCCGCCATTTTCGCGGG CTTCACGCGCGACCTCTTCACCGCCCTGGGCGAGCCGCTCGACAACGGCGCGTGGGCCGTGCGCGTGCACATCAAGCCCT TCGTGCGCTGGATCTGGCTGGGCGCGCTGTTGATGGCCGCGGGCGGCCTGCTGGCGGCCACCGACCGCCGTTATCGCCGC CGCGTACCCGGCACCGCGCCGGCCGCCTTGAACGCGGGAGAACACCCATGA Protein sequence : MIPELGLLSLALALCLAAVQASLPLAGAWRGNPRWIALAAPTAWGQFTFLLLAFAALAHAFLGDDFSVAYVARNANSALP WYYKFSAIWGAHEGSLLLWALLLAGWSCAVCVGSRQLPRTMRARVLAVMGMISVGFLLFLIATSNPFERLLPDVPADGND LNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLDGRLDAAWARWSRPWTLVAWAFLGLGIALGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALIHSLAATEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFATDPARGVFILCFLL VVVGGSLALFALRAPAVASAASFGTWSRETLLLINNLLLSVAAAMILLGTLYPLVLDALTGAKLSVGPPYFNALFVPLMA LLMAATALGVAARWKDTPPRWLAGMLGPVLAASLAFAAGAAALARDSRWTVGAVCLLAAWIVLGALRDIVDKTRHLGLRR GLPALGRSYWGMQLAHLGLAMCALGVVLNSAGNLERDLRMAPGDAVELGGYRFVFEGTTARPGPNFVAERGTMQILRDGR HVATLHPEKRVYHAQQNAMTEAAIFAGFTRDLFTALGEPLDNGAWAVRVHIKPFVRWIWLGALLMAAGGLLAATDRRYRR RVPGTAPAALNAGEHP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-112 | 58 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-105 | 56 |
