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Name : apxIIIA (APJL_1346) Accession : YP_001652346.1 Strain : Actinobacillus pleuropneumoniae JL03 Genome accession: NC_010278 Putative virulence/resistance : Virulence Product : RTX-III toxin determinant A from serotype 8 Function : - COG functional category : - COG ID : - EC number : - Position : 1478069 - 1481227 bp Length : 3159 bp Strand : - Note : - DNA sequence : ATGAGTACTTGGTCAAGCATGTTAGCCGACTTAAAAAAACGGGCTGAAGAAGCCAAAAGACAAGCCAAAAAAGGCTACGA TGTAACTAAAAATGGTTTGCAATATGGGGTGAGTCAAGCAAAATTACAAGCATTAGCAGCTGGTAAAGCCGTTCAAAAGT ACGGTAATAAATTAGTTTTAGTTATTCCAAAAGAGTATGACGGAAGTGTTGGTAACGGTTTCTTTGATTTAGTAAAAGCA GCTGAGGAATTAGGCATTCAAGTTAAATATGTTAACCGTAATGAATTGGAAGTTGCCCATAAAAGTTTAGGTACCGCAGA CCAATTCTTGGGTTTAACAGAACGTGGACTTACTTTATTTGCACCGCAACTAGATCAGTTCTTACAAAAACATTCAAAAA TTTCTAACGTAGTGGGCAGTTCTACTGGTGATGCAGTAAGTAAACTTGCTAAGAGTCAAACTATTATTTCAGGAATTCAA TCTGTATTAGGTACTGTATTAGCAGGTATTAATCTTAATGAAGCTATTATTAGTGGCGGTTCAGAGCTCGAATTAGCTGA AGCTGGTGTTTCTTTAGCCTCTGAGCTCGTTAGTAATATTGCTAAAGGTACAACAACAATAGATGCTTTCACTACACAAA TCCAGAACTTTGGGAAATTAGTGGAAAATGCTAAAGGGTTAGGTGGTGTTGGCCGCCAATTACAGAATATTTCAGGTTCT GCATTAAGCAAAACTGGATTAGGTTTGGATATTATCTCAAGCTTACTTTCAGGAGTAACTGCAAGTTTTGCTTTAGCGAA TAAGAATGCTTCAACAAGCACTAAAGTTGCTGCTGGCTTTGAACTCTCAAATCAAGTAATTGGTGGTATTACGAAAGCAG TATCAAGCTATATTCTTGCACAGCGTTTAGCTGCTGGTTTATCAACGACAGGTCCTGCTGCAGCACTAATTGCGTCTAGT ATTTCTTTAGCAATCAGTCCATTGGCGTTTTTACGTGTAGCTGATAATTTTAATCGTTCTAAAGAAATTGGCGAATTTGC TGAACGTTTCAAAAAATTGGGCTATGACGGCGATAAACTACTTTCAGAGTTTTATCACGAAGCTGGTACTATTGGTGCCT CAATTACTACAATTAGTACAGCACTTTCTGCTATCGCAGCTGGAACGGCCGCCGCGAGTGCAGGTGCATTAGTTGGCGCA CCAATTACTTTGTTGGTTACTGGTATCACAGGATTAATTTCTGGTATTTTAGAGTTCTCTAAACAACCAATGTTAGATCA TGTTGCATCGAAAATTGGTAACAAAATTGACGAATGGGAGAAAAAATACGGTAAAAATTACTTCGAGAATGGCTATGATG CTCGTCATAAAGCTTTCTTAGAAGATTCATTCTCATTATTGTCTAGTTTTAATAAACAATATGAAACTGAAAGAGCTGTT TTAATTACACAACAACGTTGGGATGAATATATTGGCGAACTTGCGGGTATTACTGGCAAAGGTGACAAACTCTCTAGTGG TAAGGCGTATGTAGATTACTTTCAAGAAGGTAAATTATTAGAGAAAAAACCTGATGACTTTAGCAAAGTAGTTTTCGATC CAACTAAGGGCGAAATTGATATTTCAAATAGCCAAACGTCAACGTTGTTAAAATTTGTTACGCCATTATTAACACCAGGT ACAGAGTCACGTGAAAGAACTCAAACAGGTAAATATGAATATATCACGAAGTTAGTTGTAAAAGGTAAAGATAAATGGGT TGTTAATGGCGTTAAAGATAAAGGTGCCGTTTATGATTATACTAATTTAATTCAACATGCTCATATTAGTTCATCAGTAG CACGTGGTGAAGAATACCGTGAAGTTCGTTTGGTATCTCATCTAGGCAATGGTAATGACAAAGTGTTCTTAGCTGCGGGT TCCGCAGAAATTCACGCTGGTGAAGGTCATGATGTGGTTTATTATGATAAAACCGATACAGGTCTTTTAGTAATTGATGG AACCAAAGCGACTGAACAAGGGCGTTATTCTGTTACGCGCGAATTGAGTGGTGCTACAAAAATCCTGAGAGAAGTAATAA AAAATCAAAAATCTGCTGTTGGTAAACGTGAAGAAACCTTGGAATATCGTGATTATGAATTAACGCAATCAGGTAATAGT AACCTAAAAGCACATGATGAATTACATTCAGTAGAAGAAATTATTGGAAGTAATCAGAGAGACGAATTTAAAGGTAGTAA ATTCAGAGATATTTTCCATGGTGCCGATGGTGATGATCTATTAAATGGTAATGATGGGGATGATATTCTATACGGTGATA AAGGTAACGATGAGTTAAGAGGTGATAATGGTAACGACCAACTTTATGGTGGTGAAGGTAATGACAAACTATTAGGAGGT AATGGCAATAATTACCTCAGTGGTGGTGATGGCAATGATGAGCTTCAAGTATTAGGTAATGGTTTTAATGTGCTTCGTGG CGGTAAAGGCGATGATAAACTTTATGGTAGCTCAGGTTCTGATTTACTTGATGGTGGAGAAGGTAATGATTATCTAGAAG GAGGCGATGGTAGCGATTTTTATGTTTATCGTTCCACTTCAGGTAATCATACTATTTATGATCAAGGTAAATCTAGTGAT TTAGATAAACTATATTTGTCTGATTTTTCCTTCGATCGTCTTCTTGTTGAGAAAGTTGATGATAACCTTGTACTTAGAAG TAATGAAAGTAGTCATAATAATGGAGTACTCACAATCAAAGACTGGTTTAAAGAAGGGAATAAATATAACCATAAAATTG AACAAATTGTTGATAAAAATGGTAGAAAATTGACAGCAGAGAATTTAGGAACTTATTTCAAAAATGCTCCAAAAGCTGAC AATTTGCTTAATTATGCAACTAAAGAAGATCAGAATGAAAGCAATTTATCTTCACTTAAAACTGAATTAAGTAAAATTAT TACTAATGCAGGTAATTTTGGTGTGGCAAAACAAGGTAATACTGGAATCAATACAGCTGCCTTGAACAATGAAGTGAATA AAATCATTTCTTCTGCTAATACCTTTGCTACTTCACAATTGGGTGGCTCAGGGATGGGAACATTACCATCAACGAATGTA AATTCAATGATGCTAGGTAACCTAGCTAGAGCAGCTTAA Protein sequence : MSTWSSMLADLKKRAEEAKRQAKKGYDVTKNGLQYGVSQAKLQALAAGKAVQKYGNKLVLVIPKEYDGSVGNGFFDLVKA AEELGIQVKYVNRNELEVAHKSLGTADQFLGLTERGLTLFAPQLDQFLQKHSKISNVVGSSTGDAVSKLAKSQTIISGIQ SVLGTVLAGINLNEAIISGGSELELAEAGVSLASELVSNIAKGTTTIDAFTTQIQNFGKLVENAKGLGGVGRQLQNISGS ALSKTGLGLDIISSLLSGVTASFALANKNASTSTKVAAGFELSNQVIGGITKAVSSYILAQRLAAGLSTTGPAAALIASS ISLAISPLAFLRVADNFNRSKEIGEFAERFKKLGYDGDKLLSEFYHEAGTIGASITTISTALSAIAAGTAAASAGALVGA PITLLVTGITGLISGILEFSKQPMLDHVASKIGNKIDEWEKKYGKNYFENGYDARHKAFLEDSFSLLSSFNKQYETERAV LITQQRWDEYIGELAGITGKGDKLSSGKAYVDYFQEGKLLEKKPDDFSKVVFDPTKGEIDISNSQTSTLLKFVTPLLTPG TESRERTQTGKYEYITKLVVKGKDKWVVNGVKDKGAVYDYTNLIQHAHISSSVARGEEYREVRLVSHLGNGNDKVFLAAG SAEIHAGEGHDVVYYDKTDTGLLVIDGTKATEQGRYSVTRELSGATKILREVIKNQKSAVGKREETLEYRDYELTQSGNS NLKAHDELHSVEEIIGSNQRDEFKGSKFRDIFHGADGDDLLNGNDGDDILYGDKGNDELRGDNGNDQLYGGEGNDKLLGG NGNNYLSGGDGNDELQVLGNGFNVLRGGKGDDKLYGSSGSDLLDGGEGNDYLEGGDGSDFYVYRSTSGNHTIYDQGKSSD LDKLYLSDFSFDRLLVEKVDDNLVLRSNESSHNNGVLTIKDWFKEGNKYNHKIEQIVDKNGRKLTAENLGTYFKNAPKAD NLLNYATKEDQNESNLSSLKTELSKIITNAGNFGVAKQGNTGINTAALNNEVNKIISSANTFATSQLGGSGMGTLPSTNV NSMMLGNLARAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyA | CAD33759.1 | hemolysin A | Virulence | PAI I 536 | Protein | 0.0 | 56 |
| hlyA | NP_755445.1 | hemolysin A | Virulence | PAI I CFT073 | Protein | 0.0 | 55 |
| hlyA | CAD42039.1 | HlyA protein | Virulence | PAI II 536 | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| apxIIIA | YP_001652346.1 | RTX-III toxin determinant A from serotype 8 | VFG1500 | Protein | 0.0 | 56 |
| apxIIIA | YP_001652346.1 | RTX-III toxin determinant A from serotype 8 | VFG0906 | Protein | 0.0 | 55 |
| apxIIIA | YP_001652346.1 | RTX-III toxin determinant A from serotype 8 | VFG1558 | Protein | 0.0 | 55 |
| apxIIIA | YP_001652346.1 | RTX-III toxin determinant A from serotype 8 | VFG0840 | Protein | 2e-163 | 48 |
