|
Name : ccmF (APJL_1385) Accession : YP_001652385.1 Strain : Actinobacillus pleuropneumoniae JL03 Genome accession: NC_010278 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1521496 - 1523445 bp Length : 1950 bp Strand : - Note : - DNA sequence : ATGGTTGCGGAATTAGGTAATTACGCATTGGCACTTGCGTTCGGATTGTCAATTTTTTTGGCAATTTTACCGCTTGTTGG TGCACAAAAACAGAATAGTACTCTTATGGCGTTAGCTCGTCCGATAACATGGGCAATGTTTTTAGCATTAACGATTTCAT TCGGTTCGCTTTTTTATCTGTTTGCGGTAAATGACTTCAGCGTGCAATACGTAGTGAATAACTCCAACTCAACATTACCT ATCCAATATCGTCTTTCTGCGGTTTGGGGATCGCACGAAGGATCAATGCTGTTATGGGTTTGGTTGCTTTCGCTTTGGTC TATCGCTGTGGCGGCATTTTCTCGCCAGATGCCGGAAGAAGCCGTTTCGCGCGTATTGAGTGTAATGGGATTAATCAGTA TCGGATTTTTGGTTTTCTTAATCTTTAGTTCAAATCCGTTTAAACGTACTTTCCCCGATTTTCCTGCGGACGGTCGAGAA TTAAATCCGATGTTGCAAGATGTCGGACTGATTTTCCATCCGCCGTTATTATATATGGGATATGTCGGTTTCTCGGTGGC ATTTGCGTTCGCGATTGCTTCACTAATGACCGGAAGATTGGATACCGCTTGGGCTCGTTGGTCTCGTCTTTGGACAATGG CGGCTTGGGTATTTTTAACACTTGGTATCGTACTCGGTTCGTGGTGGGCTTATTACGAATTAGGCTGGGGAGGCTGGTGG TTCTGGGATCCGGTTGAAAATGCTTCGTTAATGCCGTGGATTGCCGGAACGGCACTGATTCACTCGTTAGCCGTTACGGA AAAACGCGGTACTTTTAAAGCTTGGACGGTTTTACTGGCGATATTGGCGTTCTCGCTGTGTTTATTAGGCACCTTCTTAG TACGTTCCGGTATTTTGGTTTCGGTACATGCGTTTGCTTCCGATCCGACTCGCGGTTTGTATATTCTTGCCTATTTAGTT TTAGTAATTGGCGGTTCATTATTACTTTACGCTTTACAAGGCTCGAAAATTAAAAGCTTGGATAATTATGAACGTTATTC GAGAGAATCGATGTTGTTAATTAATAACGTAATGCTGATGGCATTCTTATCCGTAGTGTTGCTGGGTACATTATTACCGT TAGTACATAAACAAATCGGTTTAGGCACGATTTCGATCGGTGCGCCGTTCTTTGATCAAATGTTTTTAATTTTAATGGTA CCGTTCTCGTTTATTTTAGGTATCGGGCCATTAGTAAAATGGCGTAGAGATCAAGTATCTGCGATTCGAACACCGGTAAT TATTGCCTTAATTATGATGGTGGTACTCGGTTTCGGCTTACCGTATTTACTGCACGACCGTATTACTGCCACTTCGGTAT TAGGCGTGATGATGGCATCGATTATTGTCATTTTGAGCCTATATGAATTACATCAAAGAGCGACGCATAGACATTCATTT TTAGCCGGTGTGTTTAAATTATCCCGTTCTCATTGGGGGATGGTATTGGCGCACGTAGGTGTCGCAATGACAGTATTCGG AATCGCATTCAGCCAAAACTATAGCGTAGAGAAAAACGTACGTATGAATGTCGGCGATACGGTATCGCTTCAAGGTTACG ACTTTACTTTCAAAGGAATCAAAATTACCGACGGTGCGAACTATCAGGGCGGCACGGCTGAAATTGAGATTTCGCGTCAA GGGCAATATGAATCGACTCTGAATGCGGAGAAACGCTTCTATAACGTCAGTAAAATGGGGATGACCGAAGCGGCAATCGA CTGGGGCTTTAGAAGAGACTTATATGCCGCTTTAGGTGAAAAGTTGGAAGACGGTTCATGGGGCGTACGTTTATATTATA AACCGTTTGTTCGCTGGATCTGGATTGGCGGCTTATTTATGGTGTTCGGCGGTTTGCTCTGTATGTTTGACAAACGTTAC AGATTAAACGTAGTTAAAAAAGCTGCATAA Protein sequence : MVAELGNYALALAFGLSIFLAILPLVGAQKQNSTLMALARPITWAMFLALTISFGSLFYLFAVNDFSVQYVVNNSNSTLP IQYRLSAVWGSHEGSMLLWVWLLSLWSIAVAAFSRQMPEEAVSRVLSVMGLISIGFLVFLIFSSNPFKRTFPDFPADGRE LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRLWTMAAWVFLTLGIVLGSWWAYYELGWGGWW FWDPVENASLMPWIAGTALIHSLAVTEKRGTFKAWTVLLAILAFSLCLLGTFLVRSGILVSVHAFASDPTRGLYILAYLV LVIGGSLLLYALQGSKIKSLDNYERYSRESMLLINNVMLMAFLSVVLLGTLLPLVHKQIGLGTISIGAPFFDQMFLILMV PFSFILGIGPLVKWRRDQVSAIRTPVIIALIMMVVLGFGLPYLLHDRITATSVLGVMMASIIVILSLYELHQRATHRHSF LAGVFKLSRSHWGMVLAHVGVAMTVFGIAFSQNYSVEKNVRMNVGDTVSLQGYDFTFKGIKITDGANYQGGTAEIEISRQ GQYESTLNAEKRFYNVSKMGMTEAAIDWGFRRDLYAALGEKLEDGSWGVRLYYKPFVRWIWIGGLFMVFGGLLCMFDKRY RLNVVKKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 9e-158 | 61 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-135 | 51 |
