Gene Information

Name : ccmC (APJL_1388)
Accession : YP_001652388.1
Strain : Actinobacillus pleuropneumoniae JL03
Genome accession: NC_010278
Putative virulence/resistance : Virulence
Product : cytochrome c-type biogenesis protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 1524384 - 1525115 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence :

ATGTGGAAATGGCTTCATCCCTATGCTAAATCGGAAACACAATATCGATTATTAGGGAAAATTCAACCGGTATTAGGTTG
GTTAAGTTTTATTATGTTAGCGGTTGCTTTTGTTTGGGGGCTTGGGTTTGCGCCTAAAGATTATCAGCAAGGCGATAGTT
ATCGTATTATCTTCATTCACGTGCCTGCGGCAATTTGGTCGATGGGTGTATACGGTTCTATGGCGGTTGCCGCATTAGTG
GCATTAGTATGGCAGATTCGCCAAGCCAATCTTGCGATGATTTCAATGGCACCGATCGGTTTAGTTTTCGCATTTATCTC
GCTTGCGACCGGTGCGATTTGGGGTAAACCGATGTGGGGAACTTGGTGGGTATGGGATGCTCGCTTAACTTCGGCTTTGG
TGTTGTTTTTCCTCTATATCGGGGTAATGGCGTTGTATTCGGCTTTCCAAGATAAACAAACCGGTGCGAAAGCGGCGGGC
GTATTAGCCGTCGTCGGGGTAATAAATCTCCCTATTATCCATTTCTCGGTAGAATGGTGGAATACGTTACACCAAGGTGC
GACTATTACTAAATTAGATAAGCCGTCTATGGCGGTGGAAATGTTAATTCCGTTATTGTTAGCCATTTTCGGTAGTTTAA
TTTTTACCGCATGGTTCAGCATTTGGCGTTATCGTATCGCGTTATTAAATGATGAACGTAAGCGTCCTTGGGCGAAAACA
TTAAGTAAATAA

Protein sequence :

MWKWLHPYAKSETQYRLLGKIQPVLGWLSFIMLAVAFVWGLGFAPKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAALV
ALVWQIRQANLAMISMAPIGLVFAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDKQTGAKAAG
VLAVVGVINLPIIHFSVEWWNTLHQGATITKLDKPSMAVEMLIPLLLAIFGSLIFTAWFSIWRYRIALLNDERKRPWAKT
LSK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
ccmC	AAN62109.1	putative heme exporter protein C	Not tested	PAGI-2(C)	Protein	3e-35	47

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ccmC	YP_001652388.1	cytochrome c-type biogenesis protein	VFG1856	Protein	3e-43	49