|
Name : PputGB1_1587 (PputGB1_1587) Accession : YP_001667828.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 1789882 - 1790382 bp Length : 501 bp Strand : - Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pen:PSEEN2531 RNA polymerase sigma-70 factor, ECF subfamily DNA sequence : ATGTCGACGCTCGATCATCAGGCCCTGCATCAGCTCTACAGCGAAAACAACGGCTGGCTGAAGGGCTGGCTACGCGCCCG CCTGGGCAACTCCGCCGATGCCTCCGACCTGGCGCACGATACCTTTTTGCGGGTGATGACCGCGCGCAATCAATTGCCGA TCCGCGAGCCGCGCAGCTACCTCAGCGCCATCGCCCGTGCGCTGCTGATCGACAAGGTCCGCCGCCGCACCATCGAACAA GCCTATCTGCAGGCCCTGGCCTTGCGCCCGGAACCGGTGGAGGTTTCGCCAGAGGTGCGCTTGTCCATCATCGAAATGCT GGTAACCGTGGACAACCTGCTCGACGAACTCGGCGCCAAGACCCGCGCCATCTTCCTGGCGGTGCAACTGGAAGGCCTGA CCTACGGTGCTGCGGCCGAGCGCTTCGGCGTGTCGGTGACCACCGTGAAGAATCACCTGATCAAGGCCATGACCCGCTGC CTGCTGGCAGTCGAAGGCTGA Protein sequence : MSTLDHQALHQLYSENNGWLKGWLRARLGNSADASDLAHDTFLRVMTARNQLPIREPRSYLSAIARALLIDKVRRRTIEQ AYLQALALRPEPVEVSPEVRLSIIEMLVTVDNLLDELGAKTRAIFLAVQLEGLTYGAAAERFGVSVTTVKNHLIKAMTRC LLAVEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 6e-35 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_1587 | YP_001667828.1 | ECF subfamily RNA polymerase sigma-24 factor | VFG1049 | Protein | 2e-35 | 48 |
