|
Name : PputGB1_1870 (PputGB1_1870) Accession : YP_001668109.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : outer membrane receptor FepA Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4771 EC number : - Position : 2106627 - 2108861 bp Length : 2235 bp Strand : + Note : Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space DNA sequence : ATGCAGTGCAGAACTTCACCCAACAGCCTGGCCCTGGCGTTCGTCGCGCTGGCGTCGCCGGCCATGATGGCCACCGCGGC AGAAGCCGAGGAGCAGCGTGCGGGTGAGGTGCTGGAAGTGCCGGTTGCCGACAATGCGTTGGTGATCCAGGACACCCTGA TCACTGCCGAGCGCGAAGCGCGACAGGCCCTGGGTACGTCGATCATCACCGCCGAAGACATCAAGCGCCACCCGCCGGCC AATGACCTGTCCGACATTATTCGCCGCGAGCCCGGCGTCAACCTGACCGGCAACAGCGCCAGTGGCGCACGCGGCAACAA CCGCCAGATCGACCTGCGCGGCATGGGCCCGGAAAACACCCTGATCCTCATCGACGGCAAGCCGTCCAGCGCGCGCAACG CCGTGCGCTATGGCTGGAACGGTGACCGAGATACCCGGGGTGAAACCAATTGGGTGCCGGCCGAAGCGGTCGAGCGCATC GAGATCCTGCGGGGCCCGGCCGCCGCACGATACGGCTCCGGCGCTATGGGCGGGGTGGTCAACATCATCACCAAGCGCCC TTCTGACGAGCTGAAAGGCAGCGTCAGCCTATACACCCAACTGCCCGAAGACAGCGCCGAAGGCGCCAGCCGCCGGGCCA ACTTCAACCTCGGCGGTGGGCTTACCGATAACCTCGGCTTCCGCCTGTATGGCGGCCTGGCCAAGACGGATGCCGACGAC CTGGACATCAACGCCGGGCATGCCACCAGTGCACTGGTGGCGGGGCGTGAAGGGGTGCGCAACAAGGACATCAACGGGCT GCTGAGCTGGAAACTGAACGACGAGCATCGCCTCGAAGCCAGCGCCGGTTACAGCCGCCAGGGCAACATTTTTGCCGGCG ACACCATGAACAGCAATGGCGGCGGCGACGTCGATTTCGTCTCCAGTCTGTACGGCCACGAAACCAACGTCATGCAGCGC AGCACCTACGACCTGACCCACCTCGGTGATTTCACCTGGGGCACCAGCAAGACCACGCTGGCCTACGAGTACGTGCGCAA CTGGCGGCTCAACGAGGGCCTGGCAGGCCGCACCGAAGGTGCGCCAAGCGACGAGGGTGGAGCCATGTCACGCTTGCGCA ACACGCGCCTGAGCAGTGAAGTTAACCTGCCGTTCGCCATGGGCAGCACCGAGCACGTGCTCACTTTGGGCGGCGAGTAC CTGTATGAAGCCCTCAACGACCAGGGTTCGTTGCGCCCGCAAAGTTCCGACCCCACCAGCAATGGCGGGCTTGTCGGCTT CGATCGCAGCAGCTCGAAGATGACCGCACGCAGCTATGCGCTGTTCGTCGAAGACAACATCATTGTTGGCGACACCACCA TTACCCCTGGCTTGCGCTTCGACCACCACGAAACCTTCGGCGACAACTTCAGCCCCAGCCTCAACCTGTCCCACAAGCTG ACCGAAGCGCTGTCGGTAAAAGGCGGCATTGCCCGTGCCTATAAGGTTCCGAACCTGTACCAATCCAACCCCAACTACTT GCTGTACAGCCGCGGTAACGGTTGTAGTGTGCAGCAGACCAACAACGGTGGCTGCTACCTGCAGGGCAACGCCGACCTCA AGCCCGAGATCAGCGTCAACAAGGAGATCGGCCTGCAGTACGACCGTGGTACCTGGCGCACCAGTGCCACCTACTTCCGC AACGACTACAAGAACAAAATCATCGGTGATACCGATGTGCTTTACACCATCGGTACCGGCAGTCGCGTGACCCAGTGGGA TAACGCCGGCAAGGCGCGGGTCGAAGGTATCGAAGGCAACCTCTTCATCGAGCTGACCCCGACCCTGGACTGGAACACCA ACCTGACCTGGATGCTCGACAACGACAACCGCGAGACGGGCGAGCCGCTGTCGGTGATCCCGGAATACACCGTCAACACC ACCCTCGACTGGCGTGCCACCGAGCAGCTGTCGTTCCAGGTGGCAGGTACCTATTTCGGCAAGCAGAAATCGCCGACCTA CAACTACCGCACCCAGCAAGACTACGACAAGACCGCACAGCAGGACGTCGAGGCCTATGGCCTGGTGGACGTGAGTGCCG GGTACAAGTTCAACGCCAACTACGACGTGCGCGTGGGGGTGAACAACGTGTTCGACAAGCAGATCCTGCGGGGTGGCAAT GCCAGCAGCTCGGGGGCAAACACTTACAACCAGCCGGGCAGGGCGGTGTTCGCTGCGCTGAACATCAATTTCTGA Protein sequence : MQCRTSPNSLALAFVALASPAMMATAAEAEEQRAGEVLEVPVADNALVIQDTLITAEREARQALGTSIITAEDIKRHPPA NDLSDIIRREPGVNLTGNSASGARGNNRQIDLRGMGPENTLILIDGKPSSARNAVRYGWNGDRDTRGETNWVPAEAVERI EILRGPAAARYGSGAMGGVVNIITKRPSDELKGSVSLYTQLPEDSAEGASRRANFNLGGGLTDNLGFRLYGGLAKTDADD LDINAGHATSALVAGREGVRNKDINGLLSWKLNDEHRLEASAGYSRQGNIFAGDTMNSNGGGDVDFVSSLYGHETNVMQR STYDLTHLGDFTWGTSKTTLAYEYVRNWRLNEGLAGRTEGAPSDEGGAMSRLRNTRLSSEVNLPFAMGSTEHVLTLGGEY LYEALNDQGSLRPQSSDPTSNGGLVGFDRSSSKMTARSYALFVEDNIIVGDTTITPGLRFDHHETFGDNFSPSLNLSHKL TEALSVKGGIARAYKVPNLYQSNPNYLLYSRGNGCSVQQTNNGGCYLQGNADLKPEISVNKEIGLQYDRGTWRTSATYFR NDYKNKIIGDTDVLYTIGTGSRVTQWDNAGKARVEGIEGNLFIELTPTLDWNTNLTWMLDNDNRETGEPLSVIPEYTVNT TLDWRATEQLSFQVAGTYFGKQKSPTYNYRTQQDYDKTAQQDVEAYGLVDVSAGYKFNANYDVRVGVNNVFDKQILRGGN ASSSGANTYNQPGRAVFAALNINF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iroN | CAC43424.1 | IroN protein | Virulence | PAI III 536 | Protein | 2e-156 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_1870 | YP_001668109.1 | outer membrane receptor FepA | VFG1650 | Protein | 1e-156 | 52 |
| PputGB1_1870 | YP_001668109.1 | outer membrane receptor FepA | VFG0935 | Protein | 3e-155 | 52 |
| PputGB1_1870 | YP_001668109.1 | outer membrane receptor FepA | VFG0923 | Protein | 2e-148 | 48 |
