|
Name : PputGB1_2067 (PputGB1_2067) Accession : YP_001668304.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 2320833 - 2321339 bp Length : 507 bp Strand : - Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_3271 RNA polymerase, sigma-24 subunit, ECF subfamily DNA sequence : TTGGACAGCACATCGACCCGTAAACTGGGCTTTTTCTTCAGCGACCACCATCGCTGGTTGCTCCAGCATATCCACAAACG CCTGCGTAACCACGCCGACGCCGAAGATACCGCGGCCGAAACGTTCTGCCAGATGCTCGGCGCGCGTGTCGATCCAGACA GCATTCAGCAGCCTCGCGCCTACCTCACCATCATTGCTCGCCGGCTGATCTTCGACCGCCACCGTCGTCGCCAGCTCGAG CACGCCTATCTGGAACATCTGGCGCGGCTGCCGGAGGCCGTAGCGCCATCGGCCGAGGAGCAGCTGCTGCTGATCGAGGC TCTGGTGACCATCGATCAGGCACTGGACGGCTTGCCCGCGGTCGTCAAAGCCACCTTCCTCTATAGCCAGCTCGACGGCA TGCACTACGCCGACATCGCCGCAAAGCTGCAGATCAGCGAGCGCTCGGTCAGCCGCTACATGAAACAGGCGCTTCGCCAA TGTTACCTGTGCGAGGTGCAGGCATGA Protein sequence : MDSTSTRKLGFFFSDHHRWLLQHIHKRLRNHADAEDTAAETFCQMLGARVDPDSIQQPRAYLTIIARRLIFDRHRRRQLE HAYLEHLARLPEAVAPSAEEQLLLIEALVTIDQALDGLPAVVKATFLYSQLDGMHYADIAAKLQISERSVSRYMKQALRQ CYLCEVQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 1e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_2067 | YP_001668304.1 | ECF subfamily RNA polymerase sigma-24 factor | VFG1049 | Protein | 5e-25 | 41 |
