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Name : glcF (PputGB1_2157) Accession : YP_001668394.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0247 EC number : - Position : 2402957 - 2404192 bp Length : 1236 bp Strand : - Note : PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: pen:PSEEN3188 glycolate oxidase subunit, FeS protein DNA sequence : ATGCAAACCAACCTCAGCGAAACAGCCCGCCGCCTGGCCCGCGCCGAAGAAGCCGAAAGCATCCTGCGATCCTGCGTGCA CTGCGGCTTCTGCACCGCCACCTGCCCCACTTACCAGTTGCTAGGCGATGAACTGGACGGCCCGCGCGGGCGTATCTACC TGATCAAGCAGGTGCTCGAAGGCAAGCCGGTCACCGCCAGCACCCAGTTGCACCTGGACCGCTGCCTGACCTGCCGCAAC TGCGAAACCACCTGCCCATCCGGGGTGAAGTACCACGACCTGCTGGACATTGGCCGGGCGGTGGTCGAGCAGCAGGTGCC GCGCCCGCTCGGCCAGCGCCTGCTGCGCCAGGGCCTGTGTGCGGTAGTGCCGCGCCCGGCATTGTTCAAAGCCCTGACCC GCAGCGGCCAGGCGCTGCGCCCGCTGCTGCCGGCCACGCTCAAACGCAAGCTGCCGGCCCGCATCACGCCACCCGGCGAC CGCCCCGCGCCACGCCATGCACGCCGGGTGCTGATGCTGGAAGGTTGCGTGCAACCAACCCTGTCACCCAATACCAACGC CGCGGCTGCGCGGCTGCTCGACCGCCTGGGCATCAGCGTGCAACCGATCCAGCAGGCCGGTTGCTGTGGCGCGGTGGACT ATCACCTGAATGCTCAGGAGCAGGGCCTGCAGCGGGCACGGCGCAATATCGACGCCTGGTGGCCCGCCATCGAAGCAGGT GCCGAGGCGATCGTACAAACTGCCAGTGGCTGCGGCGCATTTGTCCGCGACTACGGCCACCTGCTGGAAAAAGACCCTCA CTACGCTGCCAAGGCCGCGCGGGTCAGCGCACTGTCCCGCGACCTGGTAGAAGTTTTGCGCGATGAACCCGTCGAGCAAC TGAGCCTTTGCGCCGAACAGCGTCTGGCCTTCCACTGCCCATGTACACTGCAGCACGCCCTGAAACTGGGCGGTGCGGTA GAAGCATTGCTGACGCGGCTGGGCTTTACCCTGACCTCGGTGCCCGACGGCCACCTGTGCTGCGGCTCGGCGGGCACTTA TTCGCTGACCCAGCCTGAATTGTCGCTGCAACTGCGCGACAATCGCCTGAATGCGCTGGAAAGCGGCAAACCGCAAGTCA TCGCCACGGCCAACATCGGCTGCCAGGCCCACCTCGACGGGGCTGGGCGCACGCCTGTGCGGCACTGGATCGAAATCGTC GAAGCAGCCTTGAACCCGGAGAACCCCCATGCATAG Protein sequence : MQTNLSETARRLARAEEAESILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGKPVTASTQLHLDRCLTCRN CETTCPSGVKYHDLLDIGRAVVEQQVPRPLGQRLLRQGLCAVVPRPALFKALTRSGQALRPLLPATLKRKLPARITPPGD RPAPRHARRVLMLEGCVQPTLSPNTNAAAARLLDRLGISVQPIQQAGCCGAVDYHLNAQEQGLQRARRNIDAWWPAIEAG AEAIVQTASGCGAFVRDYGHLLEKDPHYAAKAARVSALSRDLVEVLRDEPVEQLSLCAEQRLAFHCPCTLQHALKLGGAV EALLTRLGFTLTSVPDGHLCCGSAGTYSLTQPELSLQLRDNRLNALESGKPQVIATANIGCQAHLDGAGRTPVRHWIEIV EAALNPENPHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 5e-135 | 74 |
