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Name : PputGB1_2159 (PputGB1_2159) Accession : YP_001668396.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 2405254 - 2406753 bp Length : 1500 bp Strand : - Note : TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein; KEGG: pen:PSEEN3186 glycolate oxidase, FAD-linked subunit DNA sequence : ATGAATATCCTGTACGACGAGCGCGTCGATGGCGCGTTGCCCAACGTGAACCAGGCTGACCTGTTGCAGGCGCTGCGCGA TGCCCTGTCAGACCTCGAAATCCTGTACCGCGAAGAAGACCTCAAACCCTACGAATGCGACGGCCTGTCGGCCTACCGCA CCGTGCCACTGCTGGTGGTGCTGCCCGAGCGCCTGGAGCAGGTGCAAACACTGCTGAAACTGTGCCACCAACGTGGCGTA CCGGTGGTCGCCCGAGGCGCCGGTACCGGCCTGTCGGGCGGTGCCCTGCCGCTGGCGAAGGGCATCCTGCTGGTGATGGC GCGCTTCAATCGTATCCTTGAGGTGAACCCGCAGGGTCGCTACGCCCGTGTGCAGCCGGGCGTGCGCAACCTGGCCATCT CCCAGGCCGCCGCACCTCATGGTATGTACTACGCACCAGACCCCTCCTCGCAAATAGCCTGCTCCATCGGTGGCAACGTC GCCGAAAATGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTGCACAACCTGCTCAAGGTGGAAATCCTCACGGT CGAGGGCGAGCACCTGACCCTCGGCAGCGATGCCCTGGACAGCCCAGGTTTCGACCTGCTGGCGCTGTTCACCGGCTCCG AAGGCATGCTGGGTATCGTCACCGAAGTTACCGTCAAGCTGCTACCCAAGCCCCAGGTGGCGCGAGTGCTGCTGGCCAGT TTCGACAGCGTCGAGGACGCCGGCCGGGCAGTCGCCGACATCATCGCGGCCGGCATCATCCCCGGCGGCCTGGAGATGAT GGACAACCTGGCGATCCGCGCCGCCGAGGACTTCATCCACGCTGGCTACCCGGTGGACGCGGCGGCGATCCTGCTGTGCG AGCTGGATGGCGTGGAGGCCGACGTACACGACGACTGCGCGCGGGTCGCCGACGTACTGACGCATGCCGGGGCCCGCGAG GTGCGCCTGGCCTGCGACGAAGCCGAGCGCGTGCGCTTCTGGGCCGGGCGCAAGAACGCCTTTCCAGCGGTAGGGCGCAT CTCCCCGGACTACTACTGCATGGACGGCACCATCCCGCGCCGCGAACTGCCCCGGGTGCTCAAGGGTATCAGTGACCTGT CCGCTGAATACGGCCTGCGCGTGGCCAATGTGTTCCATGCCGGCGACGGCAACATGCATCCGCTGATCCTGTTCGATGCC AACCGCCCCGGCGAGCTGGAGCGTGCCGAAGCCATCGGCGGCAAGATCCTCGAACTGTGCGTGGCAGTGGGCGGCAGCAT CACCGGTGAACATGGCGTGGGCCGCGAGAAGATCAACCAGATGTGCGCGCAGTTCAACAGCGACGAAATCACCCTGTTCC ACGCGGTGAAGGCCGCCTTCGACCCGCAGGGCCTGCTCAACCCCGGCAAGAACATTCCCACCTTGCACCGCTGCGCCGAA TTCGGCGCCATGCATGTGCACCATGGGCAGCTGCCCTTCCCCGAACTGGAGCGTTTCTGA Protein sequence : MNILYDERVDGALPNVNQADLLQALRDALSDLEILYREEDLKPYECDGLSAYRTVPLLVVLPERLEQVQTLLKLCHQRGV PVVARGAGTGLSGGALPLAKGILLVMARFNRILEVNPQGRYARVQPGVRNLAISQAAAPHGMYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLKVEILTVEGEHLTLGSDALDSPGFDLLALFTGSEGMLGIVTEVTVKLLPKPQVARVLLAS FDSVEDAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVDAAAILLCELDGVEADVHDDCARVADVLTHAGARE VRLACDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRELPRVLKGISDLSAEYGLRVANVFHAGDGNMHPLILFDA NRPGELERAEAIGGKILELCVAVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPQGLLNPGKNIPTLHRCAE FGAMHVHHGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 0.0 | 82 |
