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Name : PputGB1_3360 (PputGB1_3360) Accession : YP_001669588.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 3794014 - 3794526 bp Length : 513 bp Strand : - Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_3271 RNA polymerase, sigma-24 subunit, ECF subfamily DNA sequence : ATGAGCGACGTGCTACCTGGCTCCGACAATCACCTGCGCAATGTAGAAGCACTCTACAACGGCCACCAAGGCTGGCTGCA TGCCAGATTGCGCAGGCGCCTGGGCAACGCGGTGGATGCAGCCGACCTGGTGCAGGATACCTTCGCGCGCATTCTGGCCT CGAAGACCGTGGTGTTTGACGAGCCACGCGCCTACTTGAGCTGTGTCGCAGGCGGCATCCTAGCCAACTGGTGCCAGCGC AAATCGCTGGAGCGTGCCTACCTCAAGGCCCTTGAACACTTGCCGGAACCCGAGGTGCCTTCGCCCGAGGCCCGCTTGCT GATTCTGGAAACCCTGCACGAGATAGATGCCATGCTCGACACCTTGCCGCCGTTGGTCAGGCGCGCGTTTCTGCTATCCC AGCTGGGCGGCATGAAGTACGCAGCCATTGCCGAGCAGCTGGGGGTATCGCTCATCACCATCAAGCGTTACATGAAACAG GCGTTTCTCCAGTGCTTGAGGCTGGTCGACTAG Protein sequence : MSDVLPGSDNHLRNVEALYNGHQGWLHARLRRRLGNAVDAADLVQDTFARILASKTVVFDEPRAYLSCVAGGILANWCQR KSLERAYLKALEHLPEPEVPSPEARLLILETLHEIDAMLDTLPPLVRRAFLLSQLGGMKYAAIAEQLGVSLITIKRYMKQ AFLQCLRLVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 5e-30 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_3360 | YP_001669588.1 | ECF subfamily RNA polymerase sigma-24 factor | VFG1049 | Protein | 2e-30 | 46 |
