Gene Information

Name : PputGB1_3615 (PputGB1_3615)
Accession : YP_001669842.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 4015767 - 4016021 bp
Length : 255 bp
Strand : +
Note : KEGG: pen:PSEEN2205 cold-shock protein CspD; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGCAAGCGGTAAAGTCAAGTGGTTCAACAATGCCAAGGGCTATGGATTCATCAATGAGGACGGCGGAACCGAAGATCT
GTTCGCACACTATTCGGCGATCCAGATGGACGGTTACAAGACGCTGAAAGCCGGACAAGCTGTGACGTTCAACATCATCC
AGGGCCCGAAAGGCCTGCATGCGGTTGAAATCAAGGGCATCAACGTCAGCGCTTCAACGGGAGTACCGAACTCGCCCACG
ACCGCTAATGCGTGA

Protein sequence :
MASGKVKWFNNAKGYGFINEDGGTEDLFAHYSAIQMDGYKTLKAGQAVTFNIIQGPKGLHAVEIKGINVSASTGVPNSPT
TANA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-14 55