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Name : PputGB1_3891 (PputGB1_3891) Accession : YP_001670117.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 4336480 - 4338468 bp Length : 1989 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: pen:PSEEN3777 periplasmic cytochrome c-type biogenesis protein CcmF DNA sequence : ATGAACGCCGCGTTGGTGATCCCCGAACTGGGCCAGTTGGCGATGATCCTGGCCATTTGCTTTGCCGCTGTGCAGGCCAG TGTGCCGCTGCTCGGTGCCTGGCGTGGCGACAGCCTATGGATGAGCCTGGCACGGCCGGCGGCGTGGGGGCAGTTTGCCT TCCTGGCGTTCGCCTTCGCCTGCCTGACCCATGCCTTCATGACCGATAACTTCTCGGTCGCCTATGTAGCCAGCAACTCC AACAGCGCCTTGCCCTGGTACTACAAGTTCAGCGCGGTGTGGGGTGCCCACGAAGGCTCGTTGCTGTTGTGGGCATTGAT CCTCGGCGGCTGGACCTTTGCCGTGTCGGTGTTTTCGCGGCAGTTGCCGCAGGTGATGCTGGCCCGCGTGCTGGCGGTCA TGGGCATGATCAGCGTGGGCTTCCTGAGCTTCCTGATCATTACCTCCAACCCGTTCCAGCGCCTGCTGCCGCAGGTGCCG ACCGATGGCCGTGACCTCAACCCGCTGTTGCAGGACTTTGGCCTGATCGTTCACCCGCCGATGCTGTACATGGGCTACGT GGGCTTTTCGGTGGCCTTCGCCTTCGCCATTGCCGCCTTGCTCGGCGGCCGCCTCGACGCCGCCTGGGCGCGCTGGTCGC GGCCGTGGACCATCGTCGCCTGGGCCTTCCTTGGCGTGGGTATCACCCTGGGCTCGTGGTGGGCCTACTACGAGCTGGGC TGGGGCGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCTTGGCTGGTGGGTACGGCGCTGATCCACTC GCTTGCAGTGACCGAAAAGCGCGGGGTGTTCAAGAGCTGGACCGTGCTGCTGGCAATTGCCGCATTCTCGCTGAGCCTGT TGGGTACCTTCCTGGTGCGCTCGGGCGTGCTGACCTCGGTGCACGCATTTGCCGCCGACCCGTCGCGGGGCATTTTCATC CTGATTTTCCTGCTGTTCGTGGTCGGTGGTTCGCTCACCCTGTTCGCCCTGCGCGCACCGGTGGTCAAGAGCCAGGTCGG GTTCGCCCTGTGGTCGCGGGAAACGCTGCTGTTGGCCAACAACCTGGTACTGGTGGTGGCGGCTTCGATGATTCTGCTCG GCACCCTGTACCCGCTGGTACTCGATGCGTTGACGGGGGCCAAGCTGTCGGTCGGCCCGCCGTACTTCGATGCCTTGTTC CTGCCGCTGATGGCGCTGCTGATGGTAGTGCTGAGCATTGGCGTGGTCGTGCGCTGGAAGGACACCCCGGGCAAATGGCT GGTCAGCATGATGACCCCGGTGCTGATCGGCAGCGCCATCCTTGCCCCGGTTGCCGGCTTCATCGTCGACGACTTCGACT GGCCGACCCTGACGGCCTTCGCCCTGGCTGCCTGGGTGGTGCTCGGCGGGCTGCGTGACATTCTCGACAAGACCCGCCAC AAGGGCCTGGTCAAGGGGCTGCCCGGCCTGGGCCGCAGCTACTGGGGCATGCAACTGGCGCACCTGGGCCTGGCGGTGTG CGCGCTGGGCGTGGTGCTGTCGAGCAACAACAGCGCCGAACGCGACCTGCGCATGGCGCCGGGCGAAAGCGTGGAGCTGG GTGGTTACCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAAGGGCCGAACTTCATCTCTGACAAGGGCACCATCGTGGTC AGCCGCAATGGCCGTGAGGTGACCACCTTGCACCCAGAGAAGCGCCTGTACACCGTGCAGCAGTCGATGATGACCGAAGC AGGCATCGACGCTGGCTTTACCCGCGACCTGTACGTCGCCCTTGGCGAGCCGCTGGAGAACGGCGCCTGGGCCGTGCGTG TGCATATCAAGCCTTATGTCCGCTGGATCTGGCTGGGCGGTCTGTTGACCGGCCTGGGCGGGTTGCTGGCGGCCCTCGAC CGGCGCTACCGCGTCAAGGTCAAGACCCGGGTACGCGATGCCCTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MNAALVIPELGQLAMILAICFAAVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVP TDGRDLNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFI LIFLLFVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALF LPLMALLMVVLSIGVVVRWKDTPGKWLVSMMTPVLIGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDILDKTRH KGLVKGLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGAKHFEGPNFISDKGTIVV SRNGREVTTLHPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALD RRYRVKVKTRVRDALGVSGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-124 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-117 | 57 |
