Gene Information

Name : PputGB1_3894 (PputGB1_3894)
Accession : YP_001670120.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 4339090 - 4339857 bp
Length : 768 bp
Strand : -
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: pen:PSEEN3780 cytochrome c-type biogenesis protein CcmC; heme ABC export system, permease protein

DNA sequence : 
ATGAAAATAAGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGGTTCTATGCCATCAGCGGCCGCATGCTGCCATG
GCTGGCCGGCGCTGCCGTGCTCCTGCTGCTGGTCGGTATCACCTGGGGCCTGGCCTTCGCTCCCCAGGACTACCAGCAAG
GCAACAGCTTCCGCATCATCTATATCCACGTGCCGGCGGCGATGCTGGCACAGTCCTGCTACGTGCTGCTGGCAGTGGCC
GGGGTGGTGGGGCTGGTGTGGAAGATGAAACTGGCCGACGTCGCCCTGCAATGCGCCGCGCCCATCGGCGCCTGGATGAC
CGCCGTGGCGCTGGTGACCGGCGCCATCTGGGGCAAGCCGACCTGGGGCAGCTGGTGGGTGTGGGATGCCCGCCTTACGT
CCATGCTCATCCTGCTGTTCCTGTACTTCGGCATTATTGCGCTGGGCCAGGCGATCAGTAATCGTGACAGTGCGGCCAAG
GCCTGCGCGGTGCTGGCGATCGTCGGCGTGGTGAACATCCCGATCATCAAGTATTCGGTGGAGTGGTGGAACACCCTGCA
CCAGGGCGCCACCTTCACCCTCACCGAAAAACCGGCGATGCCTGCAGAAATGTGGCTGCCGCTGCTGTGCACGGCGCTGG
GCTTCTATTGCTTCTTCGGCGCCGTGCTGTTGCTGCGCATGCGCCTTGAAGTGCTCAAGCGCGAGGCACGCGCCAGTTGG
GTCAAGGATGAAGTGTTGAACAGCCTGGGGCGGAGGGCCGCACAATGA

Protein sequence : 
MKISWTWFHKLGSPKWFYAISGRMLPWLAGAAVLLLLVGITWGLAFAPQDYQQGNSFRIIYIHVPAAMLAQSCYVLLAVA
GVVGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTWGSWWVWDARLTSMLILLFLYFGIIALGQAISNRDSAAK
ACAVLAIVGVVNIPIIKYSVEWWNTLHQGATFTLTEKPAMPAEMWLPLLCTALGFYCFFGAVLLLRMRLEVLKREARASW
VKDEVLNSLGRRAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_3894 YP_001670120.1 heme exporter protein CcmC VFG1856 Protein 2e-43 50