Gene Information

Name : PputGB1_4073 (PputGB1_4073)
Accession : YP_001670299.1
Strain : Pseudomonas putida GB-1
Genome accession: NC_010322
Putative virulence/resistance : Virulence
Product : anti-FecI sigma factor FecR
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3712
EC number : -
Position : 4527615 - 4528556 bp
Length : 942 bp
Strand : -
Note : PFAM: FecR protein; KEGG: pen:PSEEN2530 FecR-like transmembrane sensor

DNA sequence : 
GTGAGCCCGGCCCAGCAACGCCAGGCCCTGCGTGATGCGGCGCAGTGGCATGCCCGCTTGAGTGCCGGGGCGGACTATCA
GACGCTGTACCAGCGTTGGCAGGCCTGGCATCAGGGCGACCCGATTCATCAGTGGGCCTGGCAGCGCCTGGAGGCCTTTC
ATGCCGAGTTGCGCAGCGTGCCGTCGACTGTGGCACAACGAACGTTGGCGGTGGAACAGCCGTTGACTGGCCGGCGCACT
GTGCTCAAGGGCCTGGTGCTAGGCCTTGGCGTGTCGGGCCTGGCCTGGACCGGCTACCGCCAGACGCCACTGTGGCTGGC
CGATGTACGCACCGCTACGGGGGAACGGCGCCAGCTGCGGTTGGAGGATGGCACACAGCTCACGCTTAACACGGCCAGTG
CCGTGGACATCCGCTATGACCACCAGCAGCGGCTGATCATCCTGCGCGCTGGAGAAATCATGGTGACCACGGCCAAGGAT
GCACGGCCACTCAGCGTGCGCAGCCAGCAGGGCGAGATGCGTGCGCTGGGCACGCGCTTTGTCGTGCGCCAGTTGGACGG
GCAGACCGAACTGGACGTGCTGGAACATGCCGTTGCCGTGCGTAACCGCCCAGAGACCGAGCCGTTGCGGGTGGAGGCGG
GCATGAGCCTGCGCTTTGGTTCCGGGCCACTGCCTGCGCCACAAGTGCTCGACCCCAATCGGGATGAGTGGGTGAATGGC
CGGCTGGTGATCGACAACTGGCCGCTGGGCCAGGTGCTGGATGAGTTGCAGCGCTATCGCCCCGGCTTTATCGAGTGTGC
CAAGGAGGTTGCCCATCTACGCCTGTCTGGGGCCTTCCCGCTGGACGATACCGCGCGCGCGTTGCAGGCGATTGCCCAGG
CGCTGCCGGTGCGGATCGAGACCCGCACGCGATTCTGGGTGAGGGTGCGGCCTTTGGCCTGA

Protein sequence : 
MSPAQQRQALRDAAQWHARLSAGADYQTLYQRWQAWHQGDPIHQWAWQRLEAFHAELRSVPSTVAQRTLAVEQPLTGRRT
VLKGLVLGLGVSGLAWTGYRQTPLWLADVRTATGERRQLRLEDGTQLTLNTASAVDIRYDHQQRLIILRAGEIMVTTAKD
ARPLSVRSQQGEMRALGTRFVVRQLDGQTELDVLEHAVAVRNRPETEPLRVEAGMSLRFGSGPLPAPQVLDPNRDEWVNG
RLVIDNWPLGQVLDELQRYRPGFIECAKEVAHLRLSGAFPLDDTARALQAIAQALPVRIETRTRFWVRVRPLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecR AAL08457.1 FecR Virulence SRL Protein 2e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputGB1_4073 YP_001670299.1 anti-FecI sigma factor FecR VFG1048 Protein 1e-45 45