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Name : PputGB1_0738 (PputGB1_0738) Accession : YP_001666984.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 839599 - 840114 bp Length : 516 bp Strand : - Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: neu:NE2486 sigma factor, ECF subfamily DNA sequence : ATGCAGTTCAACGACACGCTCAAACCGACCGAGGTCGCTCTGCTCTACCAGTCCCACCATGCCTGGCTGCGCAGCTGGTT GCGCAGCCGGGTCGGCTGTAGCGAACACGCCGCAGACCTGGCGCAGGATACCTTCGTGCGCGTGTTGCGCGCCCGCCAGG TGTCGCCGCTGAAGGAGCCGCGCGCCTACCTCAGCAGCATCGCCCGTGGCTTGATGATCGACCAGTTCCGCCGCCGCGCG CTGGAACGGGCTTACCAGGAAAGCCTGGCTAACCTGCCCGAAGCAGAAGTGCCCAGCGAAGAGGACAGGCTGGTCATCCT CGATAGCCTGGAACGCCTCGACCGCGCCTTGCACCAGTTGAAGCCGCGCGTGCGCCAGGCGTTCCTGCTGGCACAGCTCG ACGGTTTGAGCATCGTGCAGGTCGCCCAACGCCTGGAGGTGTCCAGGGCCACCGTCGAGCGCGATCTGGCCAAGGCCCTG GGTGTCTGCTATCGGTTGCGCTATGCCGATGCCTGA Protein sequence : MQFNDTLKPTEVALLYQSHHAWLRSWLRSRVGCSEHAADLAQDTFVRVLRARQVSPLKEPRAYLSSIARGLMIDQFRRRA LERAYQESLANLPEAEVPSEEDRLVILDSLERLDRALHQLKPRVRQAFLLAQLDGLSIVQVAQRLEVSRATVERDLAKAL GVCYRLRYADA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 4e-34 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_0738 | YP_001666984.1 | ECF subfamily RNA polymerase sigma-24 factor | VFG1049 | Protein | 1e-34 | 46 |
