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Name : PputGB1_0745 (PputGB1_0745) Accession : YP_001666991.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 848235 - 848738 bp Length : 504 bp Strand : + Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_5893 RNA polymerase, sigma-24 subunit, ECF subfamily DNA sequence : GTGTCGTCGCTGCCCCACAACGCTCAAGTCGGCGAGCTTTACCGTGGCCATCACTCCTGGCTGCGTGGTTGGCTGTTCAA GCGCCTGGAGTGCCAGCACCAGGCTGCCGACCTGGCCCAGGACACGTTCCTTCGCCTGCTGGGGCGTGACACCTTGAATG GCCTGCGCGAGCCACGTGCATTTCTGGCCACCGTCGCCAAGGGGCTGGTGGTGGACCATTATCGCCGGCTGAGCCTGGAA CGGGCCTGGCTCGACAGCCTCGCGGCGCTGCCTGAGCCGGAAGCTCCGTCAGCCGAAGCGCGGGTGCTGGTGCTGGAAAC CCTGGTGGAAATCGACCGGATGCTCGATGGGCTGAAGCCCAAGGTGCGTAGCGCGTTCCTGCTGTCGCAGCTGGACGGGC TGACTTATCCACAAATTGCCGAACAGCTGGGCCTCTCGCTCAGTTCGGTGCAACAGTACATGACCCAGGCGTTCGGCCAT TGCTACCGGGTGCTGTATTCGTGA Protein sequence : MSSLPHNAQVGELYRGHHSWLRGWLFKRLECQHQAADLAQDTFLRLLGRDTLNGLREPRAFLATVAKGLVVDHYRRLSLE RAWLDSLAALPEPEAPSAEARVLVLETLVEIDRMLDGLKPKVRSAFLLSQLDGLTYPQIAEQLGLSLSSVQQYMTQAFGH CYRVLYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 5e-33 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_0745 | YP_001666991.1 | ECF subfamily RNA polymerase sigma-24 factor | VFG1049 | Protein | 2e-33 | 53 |
