|
Name : PputGB1_0757 (PputGB1_0757) Accession : YP_001667003.1 Strain : Pseudomonas putida GB-1 Genome accession: NC_010322 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 862847 - 863353 bp Length : 507 bp Strand : + Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: psb:Psyr_2580 sigma-70 region 2 DNA sequence : GTGTCCGCATCCCACACCAGCAAGCTGGGTTTGTTTTTCAGCGATCACCACCGCTGGTTGCTGCGGCATGTGCAACGGCA ACTGAGCAACCGCCCAGACGCCGAGGACACGGCTGCCGAAACCTTCTGCCAGCTGCTTGCCGCACGGGTCGACCCAGCGG CCATCGAGCAGCCGCGCGCCTACCTCTCGACCATTGTCAGGCGACTGATTTCCGACCGCCATCGCCGCCGACGCCTGGAG CAGGCCTACCTGGAGCGGCTGATGCTGCTGCCTGAAACGCTGGCGCCCTCGCCGGAAGAAACCCACCTGCTGCTGGAAGC CCTGCACGCCATCGACCGCAGCCTGGCAGGGCTGCCGCTGGTGGTGAAGAAGGCGTTTCTCATGAGCCAGCTCGATGGCC TGGCCTATGCGGAAATTGGTCGGCGCCTGGGCGTATCCGAACGTACGGTTGGCCGCTACATGACCCAGGCCTTGCGCCAG TGTTACCTGAGCGGGGCGCAAGCATGA Protein sequence : MSASHTSKLGLFFSDHHRWLLRHVQRQLSNRPDAEDTAAETFCQLLAARVDPAAIEQPRAYLSTIVRRLISDRHRRRRLE QAYLERLMLLPETLAPSPEETHLLLEALHAIDRSLAGLPLVVKKAFLMSQLDGLAYAEIGRRLGVSERTVGRYMTQALRQ CYLSGAQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 6e-20 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputGB1_0757 | YP_001667003.1 | ECF subfamily RNA polymerase sigma-24 factor | VFG1049 | Protein | 2e-20 | 44 |
