Gene Information

Name : Shal_1015 (Shal_1015)
Accession : YP_001673248.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Unknown
Product : ErfK/YbiS/YcfS/YnhG family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1376
EC number : -
Position : 1244956 - 1245855 bp
Length : 900 bp
Strand : +
Note : PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: slo:Shew_1006 ErfK/YbiS/YcfS/YnhG family protein

DNA sequence :
ATGATGCGTAATTTGCTGTTGTTCATCTTGGCATTTTTGCCACTGGCTTCATTTGCCAATGTTTATTCAATTCCTCAAGA
TGGCAGTCGCCTAGTTGGGGAGTTGCAAGAGCACGTCGTTCAAAAGGGGGATTTCTTCCAGACGATTTCGAAGCAATACA
ATATCGGTATTTTGGAATTGATGGAGTCAAACCCTGGTGTTGACCCATTTTTACCAACGCCAGGCACCCGTTTATTGATC
CCAACTCAGATGTTGCTGCCAGACGTACCGCATAAAGGCATAGTGATTAACTTAGCCGAGCTGCGTTTGTATTACTTCCC
TAAAGGCGGTAAAGAAGTGCATGTGTTCCCCGTGGGGATTGGCCGCGTTGGTCGTGAAACCCCTGAAATGGTAACCAAGA
TTAAGTCGCGGATTCCTAATCCCAGTTGGACACCGCCAGCAAGCATTCGTAAAGATCACTTAGAGGAGCGCGGCGAAGAA
TTACCGCGTGTGGTTCCCGCTGGACCGGATAACCCATTAGGTAAGTTTGCGATTCAGCTCTCTTATGGTGACGGTAGCTA
TCTCATCCACGGAACTAACAAGGACTTTGGTATAGGTATGCGTGTGAGTGCGGGCTGTATTCGTCTAAACCCAGATGACA
TCGAATGGTTATTCGATAAGGTGAAGTACGGCGAGCGGGTCACTATTATTAATGAAACGGTTAAAACGTCGACTGAGCCT
GATGGACGTCAGTTGATTGAGGTGCACTCTCCGTTATCAACCACAGGTGGTAAGGCCGATACTGTGAGTGAGATGAAACG
TGGTGTGGTTGAGTTTATTGGTAAAGATGATGTCGATTACACCAAAGCCAATGATGCCTTACTCACACGGTCAGGGATCC
CGGTGAATATCCAAAGCTAA

Protein sequence :
MMRNLLLFILAFLPLASFANVYSIPQDGSRLVGELQEHVVQKGDFFQTISKQYNIGILELMESNPGVDPFLPTPGTRLLI
PTQMLLPDVPHKGIVINLAELRLYYFPKGGKEVHVFPVGIGRVGRETPEMVTKIKSRIPNPSWTPPASIRKDHLEERGEE
LPRVVPAGPDNPLGKFAIQLSYGDGSYLIHGTNKDFGIGMRVSAGCIRLNPDDIEWLFDKVKYGERVTIINETVKTSTEP
DGRQLIEVHSPLSTTGGKADTVSEMKRGVVEFIGKDDVDYTKANDALLTRSGIPVNIQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-57 47