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Name : Shal_1569 (Shal_1569) Accession : YP_001673794.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : RNA methyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : - Position : 1888444 - 1889199 bp Length : 756 bp Strand : + Note : TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: shw:Sputw3181_1859 RNA methyltransferase, TrmH family, group 1 DNA sequence : ATGCTCAGCAATATTCGCGTCGTTCTTGTCGGTACTTCCCACCCAGGGAATATAGGTTCTACAGCCCGTGCTATGAAAAC CATGGGGTTATCCACTTTATATCTTGCTGAGCCAAAGGTTGAGCCGGATGGTCACTCGATCGCGTTAGCGGCGGGTGCAT CGGATATTCTAAAGCATGCGATTACCGTAGGCTCTGTAGAAGAAGCCATTGCAGATTGTAGCTTAGTGATTGCAACCAGT GCTCGTAGCCGCACGTTAGACTGGCCGATGCTTGAGCCACGTGAAGCGGGTGAGAAATTAGTTGGCTCGGCATTAACCGG CCCTGTTGCTATCGTATTTGGACGTGAAAATAATGGCCTGACTAATGAAGAGCTGCAACGTTGCGATTATCACGTTGCTA TTCCGGCTAACCCTGAATACACCTCTTTGAATCTGGCACAAGCAGTGCAGATTATCTGTTACGAGGCGCGAGTTGCGCAT CTAGCTCAAGTAGAGAGCGGCGTTGAACCTGCACCTGTTGATGAAAATGATGAAGCGTATCCATCTTCAAGAGAGCGAGA GAATTTCTTCGAGCATCTCGAAAATACGCTGTTGTCGACTAACTTTATCGTTAAGAATCACCCCGGCCAAATAATGACTA AGTTACGTCGTTTATTCAGCCGTACCCGAATTGAGCGCCAAGAGATGAACATCTTGCGTGGTATATTGACCTCGATTGAT AAAGTCGTTGACAAGACTGAGACTAAAGATAAGTAA Protein sequence : MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSTLYLAEPKVEPDGHSIALAAGASDILKHAITVGSVEEAIADCSLVIATS ARSRTLDWPMLEPREAGEKLVGSALTGPVAIVFGRENNGLTNEELQRCDYHVAIPANPEYTSLNLAQAVQIICYEARVAH LAQVESGVEPAPVDENDEAYPSSRERENFFEHLENTLLSTNFIVKNHPGQIMTKLRRLFSRTRIERQEMNILRGILTSID KVVDKTETKDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 6e-61 | 52 |
