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Name : Shal_1870 (Shal_1870) Accession : YP_001674094.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : lytic transglycosylase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1388 EC number : - Position : 2243452 - 2245011 bp Length : 1560 bp Strand : - Note : PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: slo:Shew_2115 lytic transglycosylase, catalytic DNA sequence : ATGCGCGTACCATTTTTATTCGTCGCAGGGGGCATTGCCCTGTTGACAGGTTGTCAAGCTTTAGAGAGCCAGCAGACTTC GGAAGGGATCCCTGCCAAACCAGTTGCAGTTGAGAAAGTCGCCCCAAAACCTATCGAGCCAGAAGTTGTTAAGGTCGTTG AGATCACCGATATTTGGCAACGGATCCGTTTAGACATGCAGATGGAAGTACCTGATGAAAAGCTCGTTCGCCAATATCGC GACTGGTATATCAAGCACCCTCAGCATTTAGAACGCGTATCTGAACGTGCTACGCCGTTTATGTACTTGATAGTCGAAGA AATTGAAAAGCGTAATCTACCCATCGAGTTAGCTTTGCTACCAATCGTAGAAAGTGCTTTCGATCCTTTTGCCTACTCAC ATGGTGCGGCATCGGGCCTTTGGCAATTCACTTCACCGATGGCACGCCACTTCGGACTACAGATGAACTGGTGGTATGAC GGTCGCCGTGATGTACCAGCTGCCACTACTGCCGCTTTAGATATGCTTGAGTACCTTCACGGTAAAACAGGGCAAAACTG GTTATATGCCATTGCTGCCTACAATACAGGCGAAGGTCGCGTGATCAACGCTGCGAAACGCAATAAGAAGAAAGGCATAT CGACCGATTTCTTTAGCCTTAACCTGCCAAGAGAGACAGAACGTTACGTACCTCAGCTACTCGCTTTAGCTGACGTGATC AAAAATGCCGACAAGTACGGTATTAAACTCACTCCGATTAGCAATGCGCCACAAATTGAAGTAGTCGATATTGGCAGCCA GATCGATTTAGCGCTTGCTGCCGATATCGCTAACATGAGCACTTCAGCACTGCATAAACTCAACCCAGGCTATAACCGCT GGGCGACTGCGCCTGACGGCCCACACAAGCTTGTACTGCCCGTCGACAAGGCCGATGCTTTCAGAATTGCTTTAAATAAT ACCAAAACAAATGAAAGACTTAACTGGGAACGTTACCAGATAAAATCAGGTGATAGCTTAGGCGTAATCGCTAAACGATA CCGTACAACGGTTTCAGCCTTAAAAGCGGTCAATGATATTAATGGCAACACCATTGTTGCGGGTAAGTTTTTACTGATCC CCGTAGCGGCTAAAAACTTAGATGAGTATCTCTTATCTGCTGATCAACGCTTAAATCGCCAACAAAATAAAGCGCGCGGT GCGAGTAAAATCACCTATAAAGTGGAATCTGGCGACTCACTTTGGAAAATCGCTAAGCAATATAAAGTTAAAACGGCTCA GCTTGCCAGTTGGAATAGCATGGCACCAAAAGACCCATTACAAATTGGCCAAAAACTGGTGATCTGGTCAGGAACTAAAT CCAACAAGAAAGACTTGGATAAAGTGATGCGCACCGTTAACTATAAGGTGCGAAATGGCGATTCTTTAGCGCGTATTGCG AGCAAATTCAATGTGAGTGTTAGCGACTTAGTGCGTTGGAATTCACTCGAGAAGAGCAAGTACATTCAGCCAGGTCAAAT GCTTAAGCTATATGTTGATATGACGAAGGTTAGAACATAA Protein sequence : MRVPFLFVAGGIALLTGCQALESQQTSEGIPAKPVAVEKVAPKPIEPEVVKVVEITDIWQRIRLDMQMEVPDEKLVRQYR DWYIKHPQHLERVSERATPFMYLIVEEIEKRNLPIELALLPIVESAFDPFAYSHGAASGLWQFTSPMARHFGLQMNWWYD GRRDVPAATTAALDMLEYLHGKTGQNWLYAIAAYNTGEGRVINAAKRNKKKGISTDFFSLNLPRETERYVPQLLALADVI KNADKYGIKLTPISNAPQIEVVDIGSQIDLALAADIANMSTSALHKLNPGYNRWATAPDGPHKLVLPVDKADAFRIALNN TKTNERLNWERYQIKSGDSLGVIAKRYRTTVSALKAVNDINGNTIVAGKFLLIPVAAKNLDEYLLSADQRLNRQQNKARG ASKITYKVESGDSLWKIAKQYKVKTAQLASWNSMAPKDPLQIGQKLVIWSGTKSNKKDLDKVMRTVNYKVRNGDSLARIA SKFNVSVSDLVRWNSLEKSKYIQPGQMLKLYVDMTKVRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mltD | AAO17227.1 | MltD | Not tested | tcd island | Protein | 5e-66 | 41 |
