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Name : rnhA (Shal_1874) Accession : YP_001674098.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 2247813 - 2248298 bp Length : 486 bp Strand : - Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGACTGGACTGAAACAGATCTCTATCTATACCGATGGTTCTTGCCTCGGAAATCCTGGCCCTGGCGGTTATGGCATCGT TTTAAAGTATAAAAAGCAAACAAAAGAGCTCGCTGATGGTTTTGCCCTCACCACTAACAATCGTATGGAGCTATTGGCCC CGATTGTCGCTCTGGAAGTGTTGAAAGTCCCCTGCCAAGTGATCTTAACCAGCGACAGTCAATATATGCGCCAAGGGATC ACCCAGTGGATCCACGGTTGGAAGCGTAAAGGTTGGCTCACCTCTGCGGGTCAACCAGTAAAAAATGTCGACTTATGGAA ACGTCTGGACACGGTATCACAACGTCATCAAATTGACTGGCGTTGGGTTAAAGGCCACGCAGGGCATACAGAAAATGAGC GTTGTGACGACCTTGCACGCCAAGCTGCCGAAGCTAAACCCTCACAAGAAGATAGCGGTTATATTAATCAGCAGGCTCAA GCCTAA Protein sequence : MTGLKQISIYTDGSCLGNPGPGGYGIVLKYKKQTKELADGFALTTNNRMELLAPIVALEVLKVPCQVILTSDSQYMRQGI TQWIHGWKRKGWLTSAGQPVKNVDLWKRLDTVSQRHQIDWRWVKGHAGHTENERCDDLARQAAEAKPSQEDSGYINQQAQ A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-49 | 61 |
