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Name : Shal_1875 (Shal_1875) Accession : YP_001674099.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : 2.7.7.7 Position : 2248372 - 2249100 bp Length : 729 bp Strand : + Note : KEGG: slo:Shew_2111 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease DNA sequence : ATGAATATTGTTTCAAGCGCGAAGCGACAAATTATTCTCGATACCGAAACCACAGGTATGAACCAATCGAGCGGTCCAAT TTATTTGGGCCATAGGATCATTGAAATTGGTTGTGTCGAAGTAATAAACCGCCGTTTAACGGGCCGCCATTATCATGAGT ACATTAATCCGCAACAGCCGATTGATGAAGAAGCGATTGCCGTTCACGGTATAACCAATGAGTTTGTGGCGGATAAACCA AAGTTTCATGAAATTGCACAAAGCTTTATTGAGTTTATCGATGGCGCAGAGATCGTGGCACATAACGCTAACTTCGACGT TAGCTTTATGGATCATGAATTTTCGATGTTGCAGCCGCGGGGGCCAAAGACGGCTGATATCTGTCAGATCCTAGATTCGC TCGCAATCGCTAAACATTTACACCCTGGCCAAAAGAATAACTTGGACGCCTTGTGTAAGCGTTATGGTATCGATAACTCG GCCCGTGATCTCCACGGCGCTTTACTCGATGCCGAGATTTTGGCTGACGTATACCTGTTGATGACAGGTGGTCAAACGAA ATTTAACCTTTCAAGTGAAAAAGCAGGACAAGAGGGCGGTGGTATTCATCGCCTAAGTGCGGATAGATCAAAACTTAAAG TGATCGCGGCATCGGCCGATGAACTGATAAGACACGAAGAGCGGCTCGACTTAGTCGCAAAATCAGGACAATGCCTCTGG CGCGGATAA Protein sequence : MNIVSSAKRQIILDTETTGMNQSSGPIYLGHRIIEIGCVEVINRRLTGRHYHEYINPQQPIDEEAIAVHGITNEFVADKP KFHEIAQSFIEFIDGAEIVAHNANFDVSFMDHEFSMLQPRGPKTADICQILDSLAIAKHLHPGQKNNLDALCKRYGIDNS ARDLHGALLDAEILADVYLLMTGGQTKFNLSSEKAGQEGGGIHRLSADRSKLKVIAASADELIRHEERLDLVAKSGQCLW RG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 9e-66 | 58 |
