Gene Information

Name : Shal_2076 (Shal_2076)
Accession : YP_001674294.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : 1.2.1.12
Position : 2501029 - 2502039 bp
Length : 1011 bp
Strand : -
Note : KEGG: slo:Shew_2002 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase

DNA sequence :
ATGACTATCCGAGTTGCAATTAACGGCTATGGCCGTATCGGCCGCAATGTTCTACGTGCTCTATATGAAAGCGAAAAGAA
CTATCCTATCAAGATTGTTGCGCTTAACGATTTAGGTGACGCTTCAATCAACGCTCATTTAACTAAGTACGATTCAGTAC
ACGGACGCTTTAACGCCAAAGTTGAGCACACTGATGACGCTATTTTTGTTAACGAAGATAAGATCCTGACCTTCCAAGAG
CGCGATCCTTCAAAGCTTCCTTGGAAAGAACTTGATATCGATGTGGTATTTGAATGTACCGGTATCTTCACTTCTAAAGA
GTCTGTTCAATCTCATTTAGATGCTGGTGCAAAGAAAGTGCTTATTTCTGCTCCAGGAAAGAATGTAGATGCGACTGTTG
TTTACGGCGTAAACAACGACGTTATCACCAGTGATATGACCGTAATTTCAAACGCCTCTTGTACAACTAACTGTTTAGCC
CCTTTCGCTAAGCCGTTAAATGATGAGATTGGTATTGAATCTGGTTTGATGACAACAATTCATGCTTACACAAACGACCA
ACGTTTGTCTGACGTTTACCACACCGACTTGCGCCGTGCACGCGCTGCAGCAATGTCTATGATCCCAACACAAACAGGCG
CTGCTGCCGCTGTTGGCCTTGTGGTTCCAGAGCTTGCGGGTAAATTTGACGGACTAGCCGTACGTGTACCGACTGTAAAC
GTTTCATTGGTCGACTTATCTTTTATCGCTGCACGCGACACGAGTGTTGAAGAGATCAATGCCATCATTGAGAAAGCCGC
TTCAGTAGCACCATTAAGCGAAGTCTTGGCTGTAAACCATGAGCCATTGGTATCAATTGATTTCAACCATAACCCATTCT
CTTCGAACTTTGACGCAACTCAAACTCGCGTTAATGGTCGTTTAGTAAAAGTTATGGCATGGTACGACAACGAATGGGGC
TTCAGTAACCGCATGCTAGATAATGCTGTTGCACTGATGACTGCTAAGTAA

Protein sequence :
MTIRVAINGYGRIGRNVLRALYESEKNYPIKIVALNDLGDASINAHLTKYDSVHGRFNAKVEHTDDAIFVNEDKILTFQE
RDPSKLPWKELDIDVVFECTGIFTSKESVQSHLDAGAKKVLISAPGKNVDATVVYGVNNDVITSDMTVISNASCTTNCLA
PFAKPLNDEIGIESGLMTTIHAYTNDQRLSDVYHTDLRRARAAAMSMIPTQTGAAAAVGLVVPELAGKFDGLAVRVPTVN
VSLVDLSFIAARDTSVEEINAIIEKAASVAPLSEVLAVNHEPLVSIDFNHNPFSSNFDATQTRVNGRLVKVMAWYDNEWG
FSNRMLDNAVALMTAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 2e-80 50