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Name : Shal_4100 (Shal_4100) Accession : YP_001676299.1 Strain : Shewanella halifaxensis HAW-EB4 Genome accession: NC_010334 Putative virulence/resistance : Unknown Product : periplasmic protein thiol--disulfide oxidoreductase DsbE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0526 EC number : - Position : 5002152 - 5002706 bp Length : 555 bp Strand : - Note : TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sbm:Shew185_0232 periplasmic protein thiol--disulphide oxidoreductase DsbE DNA sequence : ATGAAAAAGTTAGTATTATTTATTCCACTCGTCGTAGTTTTAGGTATGGGAGTGTTCCTCTATAAGGGACTCTTCCTTAA CCCGCAACAACTCGACTCAGCTCTAGAAGGAAAGCCGATCCCGGCTTTCCAGTTAGAGGTTTTGGAGAAGTCAGGGGAGA CCGTGACTAATGAAACGCTAAAAGGCAAGGTAGGCTTACTTAATGTGTGGGCAACTTGGTGTCCATCATGTAAGTATGAG CATCCTTTCCTAATGAGCTTAGCGCGCAAAAATATTCTACCTATATATGGTATTAACTATCGCGATGAACGTGCATTAGC TATTCGTGAGTTAAGCCGTGAAGGTAACCCATACGCAATTAATATCTATGACCATGACGGTCGCCTAGGTTTAGACCTTG GTGTATACGGTGCGCCAGAGAGTTTCCTTGTCGATCATAAAGGTGTTATTCGTTACCGTTATGCGGGGCCAATTGACCGT AATGTATGGAAAGAAACACTTTACCCTATGGTTCAACAGCTACAAGCTGAAGCGGCGAAGGATGGTGCATCGTGA Protein sequence : MKKLVLFIPLVVVLGMGVFLYKGLFLNPQQLDSALEGKPIPAFQLEVLEKSGETVTNETLKGKVGLLNVWATWCPSCKYE HPFLMSLARKNILPIYGINYRDERALAIRELSREGNPYAINIYDHDGRLGLDLGVYGAPESFLVDHKGVIRYRYAGPIDR NVWKETLYPMVQQLQAEAAKDGAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmG | YP_217240.1 | heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis | Not tested | SPI-12 | Protein | 5e-33 | 52 |
| ccmG | AAN62105.1 | putative cytochrome C biogenesis protein CcmG | Not tested | PAGI-2(C) | Protein | 4e-30 | 41 |
