Gene Information

Name : Shal_4106 (Shal_4106)
Accession : YP_001676305.1
Strain : Shewanella halifaxensis HAW-EB4
Genome accession: NC_010334
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 5008575 - 5009321 bp
Length : 747 bp
Strand : +
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: slo:Shew_0188 heme exporter protein CcmC

DNA sequence : 
ATGTGGAAATGGTTACATTCTTACGCGGATCCTGAACGCGCTTATAATTTGTCTGGAAAGCTCCTCCCTTGGTTCGCAAT
GCTCGCGATTTCGCTGATTGGTATCGGTTCTGTATGGGGTATGGTATTTGCTCCTGTTGATTACCAAATGGGCGAAAGCT
ATCGCATCATATTCATCCATGTACCTGCTGCGTCTATGTCAATGACCGCTTATATGGCAATGGCGACATCTTCATTCATC
GGCCTTGTATGGCAAATTAAAACCGCCGACTGGGCTGCGGCGGCTATCGCACCTATCGGTGCAGTACTCACCTTTATTGC
ACTAGTTACAGGTGCCACTTGGGGTAAGCCGATGTGGGGCACTTGGTGGGTGTGGGATGCACGCTTGACCTCTGAACTCG
TACTACTTTTCCTATATCTTGGCGTTATCTCTTTATACGCATCATTTGAAGATAAAGTACTTGCAGCGCGCGCCGCAGGC
ATCCTTGCTATAGTAGGTGTTATTAACATCCCAATTATCAAGTACTCTGTTGATTGGTGGAGCTCACTGCATCAGCCGGC
GTCGATTAAGCTCACCGAAAAATCGGCGATGCCTGCTGAGATGCTATATCCATTACTAATTAACATTCTAGGCTTTGGTG
TGATGATTGGTGCAATTACATTAGTGAGATTTAGATCAGAAATTTTGGCACGAAATGGCATGCGTCCATGGGTCCGTGAA
CTTGCTAAGGCAGAGGGGGTCAAATAA

Protein sequence : 
MWKWLHSYADPERAYNLSGKLLPWFAMLAISLIGIGSVWGMVFAPVDYQMGESYRIIFIHVPAASMSMTAYMAMATSSFI
GLVWQIKTADWAAAAIAPIGAVLTFIALVTGATWGKPMWGTWWVWDARLTSELVLLFLYLGVISLYASFEDKVLAARAAG
ILAIVGVINIPIIKYSVDWWSSLHQPASIKLTEKSAMPAEMLYPLLINILGFGVMIGAITLVRFRSEILARNGMRPWVRE
LAKAEGVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 2e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shal_4106 YP_001676305.1 heme exporter protein CcmC VFG1856 Protein 1e-41 49