Gene Information

Name : Caul_4165 (Caul_4165)
Accession : YP_001685787.1
Strain : Caulobacter sp. K31
Genome accession: NC_010338
Putative virulence/resistance : Virulence
Product : type I secretion system ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 4530403 - 4532583 bp
Length : 2181 bp
Strand : -
Note : KEGG: bra:BRADO6201 toxin secretion ABC transporter (ATP-binding and membrane protein); HlyB-like protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing;

DNA sequence :
ATGGGCGCTGACGGCGATCTGCTGATCGGTGCGGCGGCCGGCGAGGATGCCGCGCCGCTCGGCGCGCCTTCCCTGACCTG
CTTTGCGGCCATGCTGGGCTTCCTGGGAAAGCCGGCCGATCCGGCGCATTTGCGCCATGATCTGGGCCTGGGCGCCGAAG
ACGCCTCGATCAACGACCTGCTACGTCTGGCCAAGCGCCTGGAGGTCAAGGCCAAGCACGTCGTGACCGACGCCGCGCGA
CTGCATCGCCAGCCGTTGCCGGCGATGGCGCGCATGGCGGGCGGCTGGCTGATTGTACTGCAGGCCGCGCCGGATCGGGT
GCTGGTTTTCGATCCGCTAGCCCAGCGTCCCCAGAGCCTGACGCTTGAACAGTTCGCCGCCGGCTATGCGGGCGAACTGA
TCCTGATGACCACGCGCGAGCATGTCGCCGGCGCCGCCCGCGCCTTCGACGTCACCTGGTTCATCCCGGCCCTGGTCAAG
TACCGCCACCTGCTGCGCGACGTGTTGGTGGCTTCGCTGTTCCTGCAGGTCCTGGGCCTGATCACCCCGCTGTTCTTCCA
GGTGGTGATCGACAAGGTGCTGGTCCACAAGGGCCTGACCACCCTGGAGATCCTGGCGGTCGGCCTGCTGGTGGTCTCGG
TGTTCGAGGTGGCCATGGGCGGCCTGCGGACCTATCTGTTCTCGCACACCACCAGCCGGGTCGACGCCGAGCTTGGCGCC
AAGCTGTTCTCGCACCTCACCCAACTGCCGATGGCCTATTTCCAGGCGCGGCGGGTGGGGGACTCGGTGGCGCGGGTGCG
CGAGCTGGAGAACATCCGCGAGTTCCTGACCTCCTCGGCCCTGACCGCGGTGCTCGACCTGCTGTTCGCGGGGATCTTCC
TGGCCGTGATGTGGCTCTACAGCCCCTGGCTGCTGTTGATCGTGCTGATCACCCTGCCACTCTACGCCCTTGTGGTGGTG
CTGGTCGGTCCGGCCCTGCGCCGCAAGCTCGACGAAAAATTCGCCCGCGGCGCCGAGAACCAGTCGTTCCTGGTCGAGGC
GGTGACCGGGGTCGAGACCCTCAAGGCTCTGGCGGTCGAGCCGCAGATGCAGGGGCGCTGGGAGCGCCAACTGGCCGGCT
ACATCAAGGCCAGTTTCGACGCCCGGATGATCGCCAACTGGGGCTCGCAAGCCATCCAGCTGATCAACAAGCTCGGCGGG
GTGGCGCTGCTGTTCTTCGGCGCGCGCCTGGTGGTCGGCGACAAGCTGACGGTCGGCGAGCTGGTGGCGTTCAACATGCT
GGCCGGACAGGTGGCCGGGCCGGTGCTGCGCCTGGCCCAGCTGGCTCAGGATTTCCAGCAGGCCCAGATCTCGGTGGCCC
GGCTGGGCGACATCCTCAACACCCCGACCGAGCCCTCGTCCTCGCCGTCGCGCTCGACCCTGCCCGACATCGTCGGGCGC
ATCGCCCTGGAGAAGGTCGGCTTCCGCTACAAGGTCGACGGACCCGAGATCCTGTCGGAGATCGACCTGGTGGTCGAGCC
CGGCGAGGTGCTGGGCATCGTCGGCCCGTCCGGCTCGGGCAAGTCGACCCTGACCAAGCTGATCCAGCGCCTGCACGTGC
CCGAGCGCGGCCGGGTGCTGGTCGACGGGGTCGACCTGGCCGTGGTCGATCCGGCCTGGCTGCGCCGCCAGGTCGGGGTG
GTGCTGCAGGAGAACATCCTGTTCAACCGCACGGTCCGCGAGAACATCGCCCTGACCGACCCGGCCATGTCGATGGAGAC
CGTGGTCGCCGCCGCCAAGCTGGCCGGGGCCCACGAGTTCATCCTGGAACTGCCCGAGGCCTATGACAGCCAGATCGACG
AGCGCGGCGGCAATCTGTCGGGCGGCCAGCGCCAGCGCCTGGCCATCGCCCGCGCCCTGGCCGGCCGGCCCAAGGTGCTG
ATCTTCGACGAGGCGACCTCGGCCCTCGACGCCGAGAGCGAGGAGATCATCCAGGCCAATCTGAAGTCCATGGCTCAGGG
CCGCACGGTGATCATCATCGCCCACCGCCTGTCGGCCGTGCGTCAGGCCGACCGGATCATCACTATCGAGCGTGGCCGGA
TCACCGAGCAGGGCACGCACGCGGCCTTGATGCGCCTGGGCGGCCGCTACGCCCAGCTCTACACCAAGCAGATGGGCCTG
CCGCCGGAGGGCGTCCGATGA

Protein sequence :
MGADGDLLIGAAAGEDAAPLGAPSLTCFAAMLGFLGKPADPAHLRHDLGLGAEDASINDLLRLAKRLEVKAKHVVTDAAR
LHRQPLPAMARMAGGWLIVLQAAPDRVLVFDPLAQRPQSLTLEQFAAGYAGELILMTTREHVAGAARAFDVTWFIPALVK
YRHLLRDVLVASLFLQVLGLITPLFFQVVIDKVLVHKGLTTLEILAVGLLVVSVFEVAMGGLRTYLFSHTTSRVDAELGA
KLFSHLTQLPMAYFQARRVGDSVARVRELENIREFLTSSALTAVLDLLFAGIFLAVMWLYSPWLLLIVLITLPLYALVVV
LVGPALRRKLDEKFARGAENQSFLVEAVTGVETLKALAVEPQMQGRWERQLAGYIKASFDARMIANWGSQAIQLINKLGG
VALLFFGARLVVGDKLTVGELVAFNMLAGQVAGPVLRLAQLAQDFQQAQISVARLGDILNTPTEPSSSPSRSTLPDIVGR
IALEKVGFRYKVDGPEILSEIDLVVEPGEVLGIVGPSGSGKSTLTKLIQRLHVPERGRVLVDGVDLAVVDPAWLRRQVGV
VLQENILFNRTVRENIALTDPAMSMETVVAAAKLAGAHEFILELPEAYDSQIDERGGNLSGGQRQRLAIARALAGRPKVL
IFDEATSALDAESEEIIQANLKSMAQGRTVIIIAHRLSAVRQADRIITIERGRITEQGTHAALMRLGGRYAQLYTKQMGL
PPEGVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 1e-154 55
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 1e-154 55
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 1e-154 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caul_4165 YP_001685787.1 type I secretion system ATPase VFG1501 Protein 8e-155 55
Caul_4165 YP_001685787.1 type I secretion system ATPase VFG0907 Protein 4e-155 55
Caul_4165 YP_001685787.1 type I secretion system ATPase VFG1557 Protein 8e-155 55
Caul_4165 YP_001685787.1 type I secretion system ATPase VFG1269 Protein 3e-145 54
Caul_4165 YP_001685787.1 type I secretion system ATPase VFG0841 Protein 1e-144 53