Gene Information

Name : rnhA (Caul_4395)
Accession : YP_001686013.1
Strain : Caulobacter sp. K31
Genome accession: NC_010338
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 4768890 - 4769354 bp
Length : 465 bp
Strand : +
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
GTGACCCCCAAGCTGGTGATCTATACCGACGGCGCCTGCCGCGGGAATCCCGGTCCCGGCGGCTGGGGCGCCCTGCTGAT
GTATGGCGACAAGAAGAAGGAAATCATGGGCGGCGACCTGGCGACCACCAATAATCGCATGGAGCTGATGGCCGCCATCC
AGGCCCTGGAGGCGCTGAACAAGCCCACCAAGGCCGAACTGCACACCGACAGCCAGTACGTGATGAAGGGCGTCACCCAG
TGGATCCACGGCTGGAAGGCCAAGGGCTGGAAAACCGCCGACAAGAGCCCGGTCAAGAACGTCGACCTGTGGCAGCGCCT
CGACGCCGCCCGGGCAAGGCACGAGGTCGACTGGCGCTGGGTCAAGGGCCACGCCGGCCACGTCCATAACGAGCGGGCCG
ACGAGCTGGCGCGGCTGGGGATGCTGAAGACCTTGGGCGAGCGTGGGTCGGGAAAGGCCGTTTAG

Protein sequence :
MTPKLVIYTDGACRGNPGPGGWGALLMYGDKKKEIMGGDLATTNNRMELMAAIQALEALNKPTKAELHTDSQYVMKGVTQ
WIHGWKAKGWKTADKSPVKNVDLWQRLDAARARHEVDWRWVKGHAGHVHNERADELARLGMLKTLGERGSGKAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-39 64