Gene Information

Name : secF (ABSDF0515)
Accession : YP_001706160.1
Strain : Acinetobacter baumannii SDF
Genome accession: NC_010400
Putative virulence/resistance : Unknown
Product : preprotein translocase subunit SecF
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 470550 - 471515 bp
Length : 966 bp
Strand : -
Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f

DNA sequence :
ATGATGACTAAAGTGACTCAACAGCCTTCAAAACAATATGGTCGTCTGGTTGATGCAAAAATCATCCCGTTCATGAAGAT
TGCTAAACCTGCAGCAATCTTCTCGATCCTTATTACTTTAGCGAGCATTTTCTTTATTGGGACCAAAGGTCTTAACTTAG
GTTTGGATTTTACAGGTGGTGTTTCAGCTGAGCTTAACTATGCTCAGCCAGCAAATCAGGCAGAAGTTATTCAGGCTCTC
GACAAAGCTGGTTTTAAAGATGCTGTAGTACAAACTTTGGGTAGTAATAAAGACTTACTTGTTCGCATGCCAGTACAAGA
TATTAAGGTTGAAGATCTTAATAATGCGATTACCAAAGCTGTGCAATTGCCAAACAATGCAGCAGAAGTTCATAAAGTGG
ACTCTGTAGGTGGTCAGGTAGGTAACGAGCTTTATGTTCGTTCGGCTGGTGCTGTTGCACTTGCGCTGATTTTAATGTTG
ATCTATGTCACCATTCGCTTTGAGTTCAAACTCGCAATGGGTGCCGTGATGTCTTTATTCCATGACATCATCATCATTAT
TGGTGCATTTGCTTTATTCCAATGGCCATTTGACCTAACAGTTTTAGCTGCGGTACTTGCGGTGATTGGCTTCTCGCTTA
ACGATAACATCGTTGTTTCAGACCGTATCCGTGAAAATTTCCGTAAAATTCGCGGTGCAACTCCACGTGAAATCGTTGAT
ATTGCGTTAACTGAGACTTTACGTCGTACCATCCATACCTCAATGACCTTGTTGCTCGTAGTACTTGCAATGATGTTCTT
GGGTGGTGATGGCTTACACTGGTTCTCTGTTGCAATGTTTGTCGGTGTCTTTGTCGGTACTTACTCTTCAATTTATATCG
GTACAGCATTTGCCTTATGGCGTGGTCTTAACCGTCAAGACTTCATTGTTCAGGTCAAACCTGAATTTGAAGATGAAATC
CCTTGA

Protein sequence :
MMTKVTQQPSKQYGRLVDAKIIPFMKIAKPAAIFSILITLASIFFIGTKGLNLGLDFTGGVSAELNYAQPANQAEVIQAL
DKAGFKDAVVQTLGSNKDLLVRMPVQDIKVEDLNNAITKAVQLPNNAAEVHKVDSVGGQVGNELYVRSAGAVALALILML
IYVTIRFEFKLAMGAVMSLFHDIIIIIGAFALFQWPFDLTVLAAVLAVIGFSLNDNIVVSDRIRENFRKIRGATPREIVD
IALTETLRRTIHTSMTLLLVVLAMMFLGGDGLHWFSVAMFVGVFVGTYSSIYIGTAFALWRGLNRQDFIVQVKPEFEDEI
P

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 2e-54 47
secF AAT96066.1 SecF Not tested T-PAI Protein 1e-54 47